Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04314 ATGACCCTTAAGGGTGGAACCACACAGGCCTGCGCTGCATGCAAATTTCAGAGAAGAAAGTGCACTCCCGAGTGTCTTCTTGCACCATACTTCCCTGCAGACCAACCAAAAGTGTTCCTTAATGTCCACAAGCTATTTGGGGTGAGCAACATTGTGAAAATATTAAAGGACGTGGATCCTAGTCAGAAGAAGAATGCTATGGAGTCCATCATCGTTCAAGCTAGTTATCGCGATAAGTACCCGGTTCGTGGTTGCGTGGAAGAAATTTGCAGGCTGCAAAACCAAATTTGGCTGCACGAAGAAGAGCTTCATGCTGTGTATCAGCAGCTTGAGATGTGCAGGCAACACCAACAGCAGCAGCACCAAGGGATTCATCACGTTGTTCCTGATGATCTTGCATCACAGTTAGAGTTGGGAATGGCGCCACGCGCTGCCAACAATGCTCTTCCGCTGTTTAATCACGCGCCACAGCCCCAGCAGCAGCAGCAACAGGTTTACAATACTTCTGTGGCTGCTTTGCCTGTGTCACAGCAACATTCATATTCCAACAGCAACAGTGTGGATTATAACTCCCTTTACATTGAATCCAAGGAAAACAACAATAATGGAACAAATCCTTTGTGGGTACCTTATGCAAATAACAATGGAAGTCCCATAGCAATGCAGTCTCAGATGGTTACCTCACAGGCACTATCCATGCACCAAGAAGCTGCTGGGGATTATGATGAGATGCATCCATTTTTCGAAACGATTGATGATAGGCAATCATATATTTATTCCAAGGAGGCTTATGAATCAAGCTCAGAAGAATCACTGAAAGATTCAAGAAAGTGCACCGAGCACGTTGCTGAGAATGAATTGAAGAGTGCTGCCGCATGCTTCAGCCTTACCAGTGTCAACTAA 903 0.4563 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKDVDPSQKKNAMESIIVQASYRDKYPVRGCVEEICRLQNQIWLHEEELHAVYQQLEMCRQHQQQQHQGIHHVVPDDLASQLELGMAPRAANNALPLFNHAPQPQQQQQQVYNTSVAALPVSQQHSYSNSNSVDYNSLYIESKENNNNGTNPLWVPYANNNGSPIAMQSQMVTSQALSMHQEAAGDYDEMHPFFETIDDRQSYIYSKEAYESSSEESLKDSRKCTEHVAENELKSAAACFSLTSVN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04314 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 164 - -
Arst1g04314 300 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Arst1g04314 300 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04314 Arst-Chr1 105818650 105820134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04314 1 263 AS2 family AT3G47870 38.871 1.50e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst1g04314 LOB 3.5e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04314 1 105818650 105820134 Arst1g04314 1 105818650 105820134 ECH