Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04311 ATGGGACACAAGAAGCGAAATTCGGCTCCGCGGTCCAAACATTCGCCGGCGACTTCTCCGGCGGCGCAATTCGCCGTCGTCGGCGACGGTATCGCATCGCCGGAGAAACAAGACTCAGGCAATGTTCCCGATCACAACAGCAACACCAATAACGGCGTTCAGAACCCTAACGGGATCGAGTTTCCTCCTCCGCCACCGCCGCCGCCTCCTCCGCCTCAATCCGATGGTCCTTCCTCCGAGTACACCGCGATCAAGCTCGAGTGTGAGCGTGCCCTAACGGCGTTCCGGCGCGGGAACCACAACAGAGCACTGAAGCTCATGAAGGAGCTATGCGGGAAACAAGAGAACGCTGCTCACTCCGCATTTGCGCACCGCGTCCAGGGATTCGTCGCCTTTAAGGTCGCCGGAATCTTGAACGACCCTACCGCGAAGCAACGGCACGTGAAGAACGCCGTCGATTCGGCTCGCAAGGCCGTCGAGCTGTGCCCTAATTCGGTCGAGTACGCGCACTTCTACGCCAATTTGATGCTCGAGGTCGCGAACGACGGGAAGGATTATGAGGAGGTAGTGCAGGAGTGCGAGAGGGCGCTGGCGATAGAGAACCCTAGCGATCCAGGGAAGGAGAGCTTCCAGGATGAGAGTGATCAGAAGTTGTCGACTCCCGAGGCACGTGTTTCGCATGTGCAAAACGAGCTGCGGCAGCTGATTCAGAAGTCGAACATCGCTTCGCTGTCGAGCTGGGTGAAGAATCTGAGCAACGGCGAGGAGAGATTTCGGCTGATTCCGATTCGGAGGCCGACGGAGGACCCTATGGAGCTGAGACTGGTTCAGACTCGAAGGCCTAACGAGATCAAGAAAGTGACGAAGACGCCGGAAGAGAGGAGGAAGGAGATTGAAGTGAGAGTCGCCGCTGCGAGGCTGTTGCAGCAGAAGTCTGAGTCGCCCCAATCTCCGAACGAAGTAGATAAGGATGAGAGGGGGCTGGATTCATCTTCAGCGACTGGTCAGAGTAGGAGGAGGCATGTGAATTCGAAGAAGAATGGGTCTACTGCTGAGAGGAGGAAATGGGTGCAATCTTACTGGAGTTCGATGAGTGTGGAAATGAAGAAGGACTTGCTTAGGGTTAGGGTTTCTGATCTTAGGTCACACTTTGGGTCTTCGAAGGATACTTTGCCTATTGATCTTTTGGCGGAGGCTGTGTCGTATGCTGAGGCCAATAAGACATGGAAATTCTGGGTTTGCTGCCATTGTGATGAGAAATTTAACGATGACGAGTCTCACAGCCAACATCTTGCGCAGGCGCACATGGGTATGCTCTCGCCGAATTTGCAGGGGCATCTGCCCCATAATGTTGACAGTGAGTGGATTGATATGATTCATAATTGTTCTTGGAAGCCTCTGGATGTTTCTGCTGCAGTTAAAATGCTTGAGAGTAGAATGAAATTCAAAGGTTCAACATTAGTTGAGGATTCGTACTTCGATCATCATACACAGGACTACTATGACTGTATTAATGATGCAACTGATCCTTACCATGAGAAAGAAGGTTTGGGATACAGTCTTCATAACTGTACAACAGAAAGCAATAACTATTGTAAAGCTGTTGCAAGTAATGTGAGAGAAGGCGTTGAAAACCAATTATCTATGTCGCATCCTTTCGCTGATAGTTGGCCAGTATCTGATGATTCTGAGCGCGCAAAACTTCTGGAGAAAATTCGTGCAGTATTTGAGATGCTTATTAAGCATAAATATCTTGCTGCTAGTCACCTTAGCAAGGTTATACAATTTACTATGGGTGAGATTCAAGGTCTTGCTGCTGGTTCTCAATTTCTAAACCATGGTGTCGACCAAACGCCAATGTGCATATGCTTTCTGGGGGCATCACAGCTTAAGAAAATTCTCCAATTTCTTCAAGAGCTATCTCATGCATGCGGATTGGGTAGATATGGTGATAAAGGTAATGGTCTCATGAATGAGTTTCATGATATCAATCAAGGTCCTGAGATCAAAGAGAATATTGTTCTCAATGGAGATTCATCATGCCTCCTTCTGGATGAGTGTTTACTGGTTACACAAGTCACTTTTGATGCTGCTCAGGGGACTGTATTGGATAATATGACTGCCCAAAGTTCTCATGATGGTATTTCAAGCGATAATGATGATTTTCTATCCTGGATATATTCAGGTTCAGCTATAGGGGATCAATTGACATCATGGATGCGAACCAAAGAAGATAATAAACACCAAGGTACAGAAATTATCAAGATGCTTGATAAGGAGTTTTATCAACTACAGACCCTATGTGAGAAGAAGTCTGACCGAATGAGTTATGAGGAAGCACTGCAGACAGTAGAGGATCTTTGTCTTGAAGAGGGAAAGAAGAGGGAAATTGTTGGTGACTTTGTCCAGCAAAGCTATGAGTCTGTCTTAAGAAAACGAAGAGAAGAGCTCATTGAAAGTGAGAATGATGTGATGAATGTCGGCAATAGGTTTGAGTTGGATGCCATATCAAATGTTTTGCAAGAAGCAGAATCAATGAATGTTAATCAATTTGGATATGAAGAAACTTATGCTGGCGTGACTGCTCAGTTATGTGACTTGGAATCTGGTGAAGAAGAAGAATGGAGAATGAAAGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTGTCTATAGAGCTTAGCAAAATTGATGCTCGAATCATTAGAAATATTGCTGAGATGCAACAATTCGAACTCAAGCTTGGGCCTCTTTCCGCTTATGATTATCGGGCTATATTATTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTAGAAGAATTTGCCGAGAAGGATGCAGTAGAGAAGTCTGATGCTGCGAGGGAAGCATTCTTGGCTGAACTTGCACGTGATGCTAAGAAGGCTAAAGGGGGAAGTGAGAACACAAGAAATGTGGATAAGACCAAAGATAAGAAGAAGACTAAAGATCACAGAAAAACAAAAGATCTGAAGGCTTCAAGTGGTCATGAGGAGCTATTGCTGCAAGCTAGCAGTCCTGATTCCAATACTGTTGCACCTGATAGTTACTTTCAAGATCCTGAGCTTGTTTCCATGAATGATAATTACTTGGAACAACAGGAAGAGGAATATAGACGGAAAATAGAGCTAGAAGAGGAGGAAAAAAAGCTTGAGGAAACTTTAGAATTTCAGCGTAGGATAGAAAATGAAGCCAAACAAAAACACCTTGCCGAATTACAAAAGAAATCGTCTGGGATATGTTTAGAGGAAGTTGCGGACAAAATTCAGGATGCTCAGTTGAAGACAGTTGCTGATGGGCCAGATGTGCATGATCATGTAAAACTGCCTATACAGGAGCAGTCAGCTGATGAGAATTGCTGTCCTAGTGAAGTGGATAGTGTGATAGTCACCACTAAAAATGGTTCTTTGGTGCCAAATAAATATTCAGTTGATTCAGCTGATCAAAAGATATTGCATCAGCCAACTGTTAAACAAGCAGGTATACCTAATGGAGTTGTTCCAGAGAATGGTCATCAGTTGCCTGATCGTCGTGCAGGGAAAAAGCATAAACGGCATAGGAATTCTTCCAAAATGGTTGATGGAAAATTGGAATCTGTCTCATTGGAAAAGAATATTGAGGATGCACATACTGACAGACATTCAAGAGAGCATGTTAAATTCCATAATGATCAAGATGCAAACAATGGGTGGGAAAGCAATGTATCAAAGGCGAAGAAAGATCTGCAAATGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAGGCTGTACGACAAAGCCTGGACACATATCAAGCACGTGGAAAACTGCCTTTGGATTCTAGTTTAAGAATGTCTCAGAGATCTGCTTCACAAGTAGATTCATTGGGTTTTCCAACACAGAAAGACTCAACTGAGGATGCAAATGGAACTACATTGCTTGGTACTGGGCTAAAGAATGAAGTTGGTGAATATAACTGTTTTCTCAATGTTATTATACAGTCTTTATGGCATTTAAGACGCTTTCGGGAGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCATGTTGGCAATCCTTGTGTCGTCTGTGCATTGTATGAGATCTTCACTGCTTTGGACCTTGCATCAAAGGACTCAAGGAGAGAAGCAGTAGCACCTACTTCCCTGCGAATAGCTCTAAGCAACCTATATCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAACGATGCTTCTGAGGTACTTGCAGTGATATTTGACTGCCTTCATCGTGCATTTACCCGTGGTTCAAGTGTTTCTGACACTGAGTCGGTGGAAAGTAATTGCATGGGATCTTGGGATTGTGCAAATAATACTTGTATAGCACATTCACTTTTCGGAATGGACATTTTTGAGCAAATGAACTGCTATCACTGTGGTCTCGAGTCCAGACATTTGAAGTATACATCCTTCTTTCACAATATAAATGCCAACGCATTACGAACAATGAAGGTTATGTGTTCTGAAAGTTCCTTTGATGAGCTATTGAACCTTGTGGAGATGAACCATCAATTGGCTTGTGATCCAGAAGTTGGTGGTTGTGGCAAGCTTAACTACATCCATCACTTTCTTTCAACTCCACCTCATGTTTTTATGACAGTTCTTGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAACAGCCACTGTGGCAGCCCTGAGCACTGCACTAGACATCAGTGTCCTATATCGAGGCTTAGATCCTAAAAGAACTCATAGCTTGGTATCAGTGGTTTGCTACTATGGCCAACATTATCATTGCTTTGCTTACAGTCATGACCATGATCAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGGATGGGCAGATGTTCTTACAATGTGTGAAAAAGGACATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 4983 0.4419 MGHKKRNSAPRSKHSPATSPAAQFAVVGDGIASPEKQDSGNVPDHNSNTNNGVQNPNGIEFPPPPPPPPPPPQSDGPSSEYTAIKLECERALTAFRRGNHNRALKLMKELCGKQENAAHSAFAHRVQGFVAFKVAGILNDPTAKQRHVKNAVDSARKAVELCPNSVEYAHFYANLMLEVANDGKDYEEVVQECERALAIENPSDPGKESFQDESDQKLSTPEARVSHVQNELRQLIQKSNIASLSSWVKNLSNGEERFRLIPIRRPTEDPMELRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSPNEVDKDERGLDSSSATGQSRRRHVNSKKNGSTAERRKWVQSYWSSMSVEMKKDLLRVRVSDLRSHFGSSKDTLPIDLLAEAVSYAEANKTWKFWVCCHCDEKFNDDESHSQHLAQAHMGMLSPNLQGHLPHNVDSEWIDMIHNCSWKPLDVSAAVKMLESRMKFKGSTLVEDSYFDHHTQDYYDCINDATDPYHEKEGLGYSLHNCTTESNNYCKAVASNVREGVENQLSMSHPFADSWPVSDDSERAKLLEKIRAVFEMLIKHKYLAASHLSKVIQFTMGEIQGLAAGSQFLNHGVDQTPMCICFLGASQLKKILQFLQELSHACGLGRYGDKGNGLMNEFHDINQGPEIKENIVLNGDSSCLLLDECLLVTQVTFDAAQGTVLDNMTAQSSHDGISSDNDDFLSWIYSGSAIGDQLTSWMRTKEDNKHQGTEIIKMLDKEFYQLQTLCEKKSDRMSYEEALQTVEDLCLEEGKKREIVGDFVQQSYESVLRKRREELIESENDVMNVGNRFELDAISNVLQEAESMNVNQFGYEETYAGVTAQLCDLESGEEEEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNIAEMQQFELKLGPLSAYDYRAILLPLVKSYLRARLEEFAEKDAVEKSDAAREAFLAELARDAKKAKGGSENTRNVDKTKDKKKTKDHRKTKDLKASSGHEELLLQASSPDSNTVAPDSYFQDPELVSMNDNYLEQQEEEYRRKIELEEEEKKLEETLEFQRRIENEAKQKHLAELQKKSSGICLEEVADKIQDAQLKTVADGPDVHDHVKLPIQEQSADENCCPSEVDSVIVTTKNGSLVPNKYSVDSADQKILHQPTVKQAGIPNGVVPENGHQLPDRRAGKKHKRHRNSSKMVDGKLESVSLEKNIEDAHTDRHSREHVKFHNDQDANNGWESNVSKAKKDLQMEDEEEERFQADLKKAVRQSLDTYQARGKLPLDSSLRMSQRSASQVDSLGFPTQKDSTEDANGTTLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLGRSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRAFTRGSSVSDTESVESNCMGSWDCANNTCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKVMCSESSFDELLNLVEMNHQLACDPEVGGCGKLNYIHHFLSTPPHVFMTVLGWQNTCESADDITATVAALSTALDISVLYRGLDPKRTHSLVSVVCYYGQHYHCFAYSHDHDQWIMYDDKTVKIIGGWADVLTMCEKGHLQPQVLFFEAVN 1660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04311 1660 MobiDBLite consensus disorder prediction 1 79 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 206 220 - -
Arst1g04311 1660 Pfam Protein of unknown function (DUF627) 90 201 IPR006866 -
Arst1g04311 1660 Gene3D Tetratricopeptide repeat domain 81 212 IPR011990 GO:0005515
Arst1g04311 1660 Coils Coil 1257 1277 - -
Arst1g04311 1660 Pfam Protein of unknown function (DUF629) 357 889 IPR006865 -
Arst1g04311 1660 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1659 - -
Arst1g04311 1660 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1659 - -
Arst1g04311 1660 CDD Peptidase_C19 1418 1657 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 1175 1205 - -
Arst1g04311 1660 Gene3D Cysteine proteinases 1309 1658 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 307 351 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 1290 1319 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 978 994 - -
Arst1g04311 1660 SUPERFAMILY Cysteine proteinases 1327 1657 IPR038765 -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 1014 1028 - -
Arst1g04311 1660 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1327 1659 IPR028889 -
Arst1g04311 1660 ProSitePatterns Zinc finger C2H2 type domain signature. 414 435 IPR013087 -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 58 76 - -
Arst1g04311 1660 Pfam Ubiquitin carboxyl-terminal hydrolase 1328 1635 IPR001394 GO:0004843|GO:0016579
Arst1g04311 1660 Coils Coil 1042 1083 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 200 221 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 978 1028 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 39 57 - -
Arst1g04311 1660 MobiDBLite consensus disorder prediction 1293 1319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04311 Arst-Chr1 105802981 105812874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04311 84 1657 C2H2 Transcription Factor Family AT3G47890 56.757 0.0 1702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04311 - - adu:107493676 3278.8