Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04301 ATGGGGGACAAATCCGTGGAGTTAGAGGCTGTTCTCAAAGAAACTGTGGATTTGGAGAACATACCCATTGAGGAAGTTTTTGAGAATCTGAGATGTAGCAGAGAAGGTCTCAGCAGCAAGGCTGCTGAGGAAAGACTCGCCATTTTTGGCCACAACAAGCTTGAAGAGAAAAAGGAGAGCAAGTTTTTGAAGTTCTTGGGATTTATGTGGAATCCTCTTTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCTCTTGCCAATGGAGGGGGTAAGCCTCCTGATTGGCAAGACTTTGTTGGTATTATCACTTTGCTTGTCATCAATTCAACCATCAGTTTCATAGAGGAGAACAATGCTGGTAATGCTGCTGCAGCTCTCATGGCTCGTCTCGCTCCGAAAGCAAAGGTTCTTCGTGATGGTAGGTGGAACGAACAAGATGCCGCAGTCCTGGTTCCTGGTGACATCATCAGCATCAAACTTGGAGATATTATCCCTGCAGATGCTCGCCTTCTCGAAGGTGATCCTTTGAAAATTGATCAGTCTGCACTTACCGGTGAGTCCCTACCAGTGACAAAGGGTCCCGGTGATGGTGTGTATTCTGGTTCAACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATCGCTACCGGTGTTCACACCTTCTTTGGGAAAGCTGCTCACCTTGTAGATACTACTAATCAAGTCGGTCACTTTCAACAGGTCTTGACTGCAATTGGTAACTTCTGCATATGTTCTATTGCTGTGGGGATGATCATCGAGATCATTGTTATGTATCCCATTCAAGATAGAAAATATCGTCCGGGAATAGATAACCTGCTTGTGCTTCTTATTGGAGGAATTCCAATTGCCATGCCGACGGTTTTGTCCGTGACCATGGCTATTGGTTCTCATAGGCTCTCTCAGCAGGGTGCTATCACAAAGAGGATGACAGCCATTGAAGAAATGGCAGGCATGGATGTTCTTTGTAGTGACAAGACTGGGACTTTAACACTAAATAAGCTTACGGTCGACAAAAATCTTGTCGAGGTTTTTGCAAAAGGAGTGGACCCGGATACTGTTGTTTTGATGGCAGCTCGAGCTTCAAGACTTGAGAATCAAGACGCCATAGATACTGCCATTGTTGGGATGCTGGCTGATCCAAAGGAGGCACGTGCCGGTATACAAGAAGTGCATTTTCTTCCTTTCAATCCAACTGATAAGAGGACTGCATTGACCTATATTGATCAAGATGGCAAAATGCATAGAGTAAGCAAAGGTGCACCCGAACAGATCCTACACCTTGCCCACAACAAATCAGACATCGAACGCAGAGTTCATGCAGTGATTGATAAGTTCGCAGAGCGCGGTCTGCGATCTCTTGCTGTAGCATACCAGGAAGTTCCCGATGGAAGGAAAGAAAGTGCTGGAGGCCCATGGCAGTTTATTGGCCTTATGCCTCTCTTTGACCCACCTAGGCATGATAGTGCCGAAACAATACGGAGGGCACTAAATCTCGGAGTAAATGTCAAAATGATTACAGGTGATCAACTAGCTATAGGAAAGGAAACAGGACGACGCTTGGGAATGGGTACCAATATGTACCCTTCATCTGCTTTACTTGGACAGGACAAGGATGAATCCATTGCTGCCTTGCCCATTGATGAACTAATCGAAAAAGCCGATGGATTTGCTGGTGTATTTCCTGGTATGTCTCAATACTATCCCGGGGATTTCACGTGTACTCGAATAAGTATTGATATGATTGTTGTTTTATATTTTTGGTCAGAGCACAAGTACGAGATTGTGAAGCGTTTGCAAGCGAGGAAACATATCTGTGGAATGACTGGTGATGGAGTGAATGATGCACCTGCTCTAAAGAAGGCAGACATTGGTATAGCTGTCGCCGACGCCACGGATGCTGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGTCTTAGTGTTATCATAAGTGCTGTTTTGACCAGCCGAGCTATTTTCCAGAGAATGAAAAATTATACAATTTATGCTGTCTCAATCACAATTCGTATCGTGCTCGGTTTCATGTTGCTGGCTCTCGTATGGAAGTTTGATTTTCCACCTTTTATGGTTCTTATTATTGCTATCCTGAATGATGGTACTATTATGACAATTTCAAAGGATAGAGTAAAACCGTCACCACTGCCGGATAGCTGGAAGCTAGCAGAGATATTTACTACTGGCATTGTGCTCGGAAGTTACTTGGCAATGATGACTGTCATTTTCTTTTGGGCTGCATACAAGACAAATTTCTTCCCGCGAGTGTTTGGTGTTTCAACCCTTGAAAAAAGTGCTCATGATGATTTCCGAAAACTCGCCTCAGCAATTTATCTTCAAGTGAGCACCATTAGTCAAGCTCTTATATTCGTGACTCGTTCTCGAGGCTGGTCATATGTCGAGCGTCCGGGATTATTGCTGGTGGTTGCTTTCGTAGTTGCTCAGCTGATCGCCACGTTGATCGCAGTATATGCAAACTGGAGCTTTGCCGCGATCGAAGGAATAGGATGGGGTTGGGCTGGTGTAATATGGCTGTATAACATAATATTCTACATCCCTCTTGATATCATCAAATTCTTGATTCGCTATGCTTTGAGTGGAAGGGCTTGGGATCTTGTCATTGAGCAAAGGATTGCATTCACTAGGCAAAAGGACTTTGGGAAAGAACAAAGGGAACTTCAATGGGCACATGCTCAAAGAACACTGCATGGATTGCAAGCCCCTGACACTAAGATGTTCACTGAGCGCACGCATTTCAATGAGCTCAATCAAATGGCCGAAGAAGCTAAGAGGAGAGCCGAAATTGCGAGGTTGAGAGAGCTCCACACACTGAAAGGTCATGTGGAATCAGTTGTGAGATTGAAGGGTCTGGACATAGACACAATTCAGCAAGCATACACAGTCTGA 2952 0.4472 MGDKSVELEAVLKETVDLENIPIEEVFENLRCSREGLSSKAAEERLAIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQQVLTAIGNFCICSIAVGMIIEIIVMYPIQDRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDPDTVVLMAARASRLENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDQDGKMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPGMSQYYPGDFTCTRISIDMIVVLYFWSEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALVWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKSAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVVAFVVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDIIKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04301 983 Gene3D - 328 570 IPR023214 -
Arst1g04301 983 Gene3D - 932 983 - -
Arst1g04301 983 Coils Coil 934 954 - -
Arst1g04301 983 SFLD p-type atpase 313 668 IPR044492 -
Arst1g04301 983 SFLD p-type atpase 313 668 IPR044492 -
Arst1g04301 983 SUPERFAMILY HAD-like 327 664 IPR036412 -
Arst1g04301 983 Gene3D - 343 490 IPR023299 GO:0000166
Arst1g04301 983 FunFam ATPase 2, plasma membrane-type 485 577 - -
Arst1g04301 983 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Arst1g04301 983 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g04301 983 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g04301 983 PRINTS H+-transporting ATPase (proton pump) signature 793 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g04301 983 Pfam haloacid dehalogenase-like hydrolase 327 631 - -
Arst1g04301 983 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Arst1g04301 983 Pfam E1-E2 ATPase 132 310 - -
Arst1g04301 983 SFLD Haloacid Dehalogenase 313 668 - -
Arst1g04301 983 SFLD Haloacid Dehalogenase 313 668 - -
Arst1g04301 983 Gene3D - 96 327 - -
Arst1g04301 983 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 880 IPR023298 -
Arst1g04301 983 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Arst1g04301 983 Gene3D - 655 848 - -
Arst1g04301 983 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Arst1g04301 983 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Arst1g04301 983 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Arst1g04301 983 PRINTS P-type cation-transporting ATPase superfamily signature 617 636 - -
Arst1g04301 983 PRINTS P-type cation-transporting ATPase superfamily signature 640 652 - -
Arst1g04301 983 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Arst1g04301 983 PANTHER CALCIUM-TRANSPORTING ATPASE 19 916 - -
Arst1g04301 983 PANTHER CALCIUM-TRANSPORTING ATPASE 19 916 - -
Arst1g04301 983 CDD P-type_ATPase_H 36 874 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst1g04301 983 Gene3D - 598 654 IPR023214 -
Arst1g04301 983 NCBIfam HAD-IC family P-type ATPase 103 366 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g04301 983 NCBIfam HAD-IC family P-type ATPase 598 697 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g04301 983 FunFam Plasma membrane ATPase 590 665 - -
Arst1g04301 983 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Arst1g04301 983 FunFam ATPase 4 plasma membrane-type 585 848 - -
Arst1g04301 983 FunFam Plasma membrane ATPase 134 218 - -
Arst1g04301 983 FunFam Plasma membrane ATPase 343 490 - -
Arst1g04301 983 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 570 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst1g04301 983 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 570 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst1g04301 983 Gene3D - 134 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04301 Arst-Chr1 105605361 105611397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04301 1 983 Primary Pumps ATPases AT5G62670 91.353 0.0 1797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04301 K01535 - rcu:8258168 1749.56