Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04273 ATGGAGTTTGCTGCTAGATCTGGTGATGATGGAGGTGATTCACCACTCAAGGAAGAGAAGAAGAGAAGTGATGAGTATACTGATGATGATGGTGGAAGCCATGGTGATCATCATGATCATGCTCCTTCTAATAAGCAAGACACAATAATTGTCAAGGAGCCGCCACACATGAATAAGACTGATAACAACACTGAAAAATCCATGGCGGAAGAAGCTTCTGGAACAAGCGCGCTATTGGCAGCCAAAAAGGAAGAGGTTATTGATAAACAACTTGAAAGCACTAAGGCTGAAATGGGTGAGGTTCGAGAGGAGAATGAACGGTTAAAGATGTCGTTGAACAAGATCATGAGCGAGTACCGAATGCTTCAAATGCAGTTTCACAACATAGTTAACAACAAGCATGAAGATAATCAAGAAACAATAATGGAGGAAGCAGACCTAGTTTCGCTCAGCCTTGGAAGAGTTCCAGTTCCAAGAAGAAGCAATGAAGAAGATAAAAAAGTCTCTGATAGTAACAAGAGGAAGAAGGAGGATGAAGATGATGAAGAATTGAATGAGGAATTGGCACTTGGATTGGACTGCAAGTTCGAAACTTCGAAATCGGGGAGCACAACGGAAGCTACCAATTTTCCGAATAATAGTAACAAGGAAGAAGGTGGTGAGAGTACATGGCCACCACCAGCAAGCAAGGCCAGAGAAGGTGGTGGCAGCGGCGGCGGTGGTGGTGCGGCATCGGCATCTGCATCAGTTGTAGAAGATGAAGTATCCCAACAGAATAATAATCCTGCTGCCAAGAAAGCTAGAGTTTGCGTCAGGGCAAGATGCGACACCCCGACTATGAATGATGGGTGTCAATGGAGGAAATATGGACAAAAGATTTCCAAGGGAAACCCATGCCCTCGAGCTTACTATCGTTGCACAGTTGCACCCTCGTGTCCCGTTAGGAAACAGGTGCAAAGGTGTGCGGAGGACATGTCGATTCTAATCACCACCTATGAAGGGAACCACAACCACCCTCTCCCTCTCACAGCCACTGCCATGGCTTCTACAACCTCCGCCGCCGCATCCATGTTACTTTCCGGCTCCTCAACCTCACACACTATGGCTCCCACAAACACGGCCACCGCGGCCGCAGCCGGCAACCTCCACGGCCTGAACCTCTACCTCCCAGACGGCTCAAAATCAAGACAAATATACGTCTCAAACCCCGCACTATCATCCACACCATCACACCCAACAATAACCCTTGACCTCACTTCTTCAAACCCTAATTTGAATAATAATAATTCCTCATCTCCATTTGTTAGGTTTTCTTCAAACTACCCTAACCAACCAATCAGATACCCTTCTTCCACAAGCCTTAGCTTCAGTACTTCCAACGATCCCAATCCACTTTCTTGGAGCAATAATGGATTCCTCAGTAGCTACAATAGTACTCATCATCAACCATTCAACAGAAGCATCAACATGCTCAGTAATAATAATTTGAACTTCGAAAGGCAACAACAACAACAAACAATGGAGAACTTCTATCAGTCTTTCATGCAAAGGAACAACAGCAAGAACGCATCATCATCATCATCATCATCATCATCATCATCAGATCCTATTGCCGCTGCAACAAAAGCAATAACAGCGGATCCCAGTTTTCAATCGGCTTTGGCTGCGGCCTTGTCTTCGTTCATTGGTGGCGGCAGCGGCATTGGAAGCACACATCATCAAGGGAATAATTATAACCAAGTTGGTGGTGGTGGTGGTGATGGAGAAAACAGTAATAAGATGAAATTTTCAGAGCTGTTTCCAGTTTCCTCTACCTTGGCTTCGAGTTCGAAAGTCATCAATAATAGTAATAATGGCGGATGTGGTTCGAGCTTCTTGAACAAAACGCAACCAACAAAAACAACACAGAATAATGGAAGCTTCATGTTTCTTCCACCTTCTTTGCCATTTTCTTCTTCTCCAAAGAGTGCTTCTGCATCTCCCGGTGATAATGGAGGTGATGATCATAGATCATCATGA 2019 0.4487 MEFAARSGDDGGDSPLKEEKKRSDEYTDDDGGSHGDHHDHAPSNKQDTIIVKEPPHMNKTDNNTEKSMAEEASGTSALLAAKKEEVIDKQLESTKAEMGEVREENERLKMSLNKIMSEYRMLQMQFHNIVNNKHEDNQETIMEEADLVSLSLGRVPVPRRSNEEDKKVSDSNKRKKEDEDDEELNEELALGLDCKFETSKSGSTTEATNFPNNSNKEEGGESTWPPPASKAREGGGSGGGGGAASASASVVEDEVSQQNNNPAAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGNHNHPLPLTATAMASTTSAAASMLLSGSSTSHTMAPTNTATAAAAGNLHGLNLYLPDGSKSRQIYVSNPALSSTPSHPTITLDLTSSNPNLNNNNSSSPFVRFSSNYPNQPIRYPSSTSLSFSTSNDPNPLSWSNNGFLSSYNSTHHQPFNRSINMLSNNNLNFERQQQQQTMENFYQSFMQRNNSKNASSSSSSSSSSSDPIAAATKAITADPSFQSALAAALSSFIGGGSGIGSTHHQGNNYNQVGGGGGDGENSNKMKFSELFPVSSTLASSSKVINNSNNGGCGSSFLNKTQPTKTTQNNGSFMFLPPSLPFSSSPKSASASPGDNGGDDHRSS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04273 672 SMART WRKY_cls 280 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g04273 672 ProSiteProfiles WRKY domain profile. 275 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g04273 672 MobiDBLite consensus disorder prediction 197 220 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 158 180 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 153 263 - -
Arst1g04273 672 Pfam WRKY DNA -binding domain 281 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g04273 672 Coils Coil 91 118 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 1 83 - -
Arst1g04273 672 Gene3D WRKY domain 264 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g04273 672 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 61 576 IPR044810 GO:0003700
Arst1g04273 672 MobiDBLite consensus disorder prediction 623 672 - -
Arst1g04273 672 SUPERFAMILY WRKY DNA-binding domain 273 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g04273 672 FunFam probable WRKY transcription factor 31 265 342 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 623 660 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 573 594 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 402 438 - -
Arst1g04273 672 MobiDBLite consensus disorder prediction 11 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04273 Arst-Chr1 105243670 105249856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04273 98 580 WRKY Transcription Factor Family AT5G15130 39.417 1.96e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst1g04273 WRKY 8.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04273 - - adu:107467779 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03674 4 115651430 115653923 Arst1g04273 1 105243670 105249856 ECH
Arst3g05085 3 126176281 126178593 Arst1g04273 1 105243670 105249856 ECH
Arst1g04273 1 105243670 105249856 Arst1g04273 1 105243670 105249856 ECH
Arst3g05085 3 126176281 126178593 Arst1g04273 1 105243670 105249856 PCT