LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g04272	ATGCCGGCGGTGAGGAAAGATGATGAAGACCTAAGTCCGTCCCGTTCATTTCGGTACAGTGTTAAGGTTGTGCAGCTTCGTTTAGCCAATGGTGATGTATCTAAAAAAAAGAGGGAGCACAAGGTAGTGACTCGTTGCGGGTGTCCTGTGGAGATGCGTATTAAGCCTAAAGGGGATAGTGGGAGATGGATTGTGTCTCTTTTTGTGGAGGAACATAACCATGAGCTGCTGCCTATGAAGTATGTGGACTATCTACCTGCACACCGTAAGATATCTGATGTTGATATTGCACACATGGAGAGCATGAGGCAAGTTGGGATATCAATTCCAAAGATCTATGAGTCCATTGCTGCACAGGTGGGAGGTTTTAATTTGGTTCCGTTTACAAAGCGAGATATGTACAATGAGATTAGGCGACAAAGGGCGATGCAGAATGGTGACGTGAATGCTGCGTTGAGGGTTTTGGAGGGTGCGGCCCGGACGGACGAGAAATTGTATTGGAGGTACGAGGTTGGTGAGGGGCAGCACATGTGCGATCTATTTTGGAGTGATGGGCGAAGCCAGGATGATTATAAAGTATTTGGAGATGTACTAGCATTCGATGCAACATACGGGCGGAACAAGTACAATCTGCCAGTAATTGTTTTTTCTGGGGTTAATCATCACAACTAG	672	0.4628	MPAVRKDDEDLSPSRSFRYSVKVVQLRLANGDVSKKKREHKVVTRCGCPVEMRIKPKGDSGRWIVSLFVEEHNHELLPMKYVDYLPAHRKISDVDIAHMESMRQVGISIPKIYESIAAQVGGFNLVPFTKRDMYNEIRRQRAMQNGDVNAALRVLEGAARTDEKLYWRYEVGEGQHMCDLFWSDGRSQDDYKVFGDVLAFDATYGRNKYNLPVIVFSGVNHHN	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g04272	223	Pfam	FAR1 DNA-binding domain	34	78	IPR004330	-
	Arst1g04272	223	PANTHER	OS01G0519700 PROTEIN	30	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g04272	Arst-Chr1	105221714	105223858	Dispersed/Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst1g04272		FAR1	1.1e-08	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g04272	-		-	adu:107470605	460.299