Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04249 ATGGAGGGAGGTGATGACTTCCACCACCATCACCATCATCACCAACACCACCACCACCGACAGAACTTCCCCTTCCAACTTCTAGAGAAGAAAGAAGATCAAGAAGCAGCGTCGTGCTCAACTTCCTCCCCTTACCCTTCCCTAGCTATCTCATCTGCAGAACCATCCACTTCAAATTCAAACCGATCCAATCCAAACAGCAACACTGCAAACAACAACAATAACAACAGCAACAACAACCAATTAGCCTTACAACAAGAACAGCAAATACAGCCTTCTTTATCCTCTGAACCTTCTGGAAAGAAGCCTCCTCCTAAGCGGACATCCACCAAGGACCGCCATACAAAAGTCGATGGCCGTGGCCGCCGCATCCGAATGCCAGCTCTCTGTGCAGCCAGAGTGTTCCAGCTGACACGAGAGCTCGGCCACAAGTCCGATGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCAGCCGTGATCGCCGCCACCGGAACCGGAACAATCCCCGCAAACTTCACGTCCCTCAACATCTCCCTCCGCAGCAGCGGTTCCTCCATGTCCGTACCATCCCAGCTCCGATCCTCATACTTCAGCCCTAACTTCCCCCTCCAAAACCGCCGAACCTTGTTCCCCGGAATAACCCTCTCGTCCGACACCACCACCGCCAGTAACAACAACAACAGCAACAACAACACCACCACTCTCCTTAACTTCCAACAGCAACAGCAAACCCTAACCGCAAATATTTTCAAGCAAGAACTGAGAGAGAGCCATGGCGCTCCCTCTTCTTCTTCCACGTTGGATTTATCTGAAACAAGCGCGGAAGAAGGTTCGTTAGGGAGAAAGAGAAGGCCGCCATCGGAACACGACCTATCTTCTTCAGCACAGCACCAAATGGGAAGCTACCTGCTGCAATCAAGCGCAGGCGCGATTCAGGCGAGCCACGCAGCTCAGATTCCGGCCAACATATGGATGGTGGCGAATTCCCAAAATGCCCCTCAGGTTATGAGTGGTGACCCTATATGGACGTTTCCAACGCAGGTTAGTAACAGTGGGTTGTACCGTGGAACCGTTTCCAGTGGTTTGCACTTTATGAACTTCCCTACTCCTATGGCTTTGTTGACGAGTCAGCAATTAGGTTCTTCCGGTGGCGGAGGCAGTGTCAACGAAAGCCATTTGAATATGATCGCCGGTCTCGGCAGTTACCGTCCGGTCATCGGAGTTTCAGAATCGTCTCAGGCCAGTGGCTCTCATCAACATCATCGAGATGGAACCGATGATCGACACGATAGTACCAGCCACCACTCTTGA 1317 0.5239 MEGGDDFHHHHHHHQHHHHRQNFPFQLLEKKEDQEAASCSTSSPYPSLAISSAEPSTSNSNRSNPNSNTANNNNNNSNNNQLALQQEQQIQPSLSSEPSGKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFSPNFPLQNRRTLFPGITLSSDTTTASNNNNSNNNTTTLLNFQQQQQTLTANIFKQELRESHGAPSSSSTLDLSETSAEEGSLGRKRRPPSEHDLSSSAQHQMGSYLLQSSAGAIQASHAAQIPANIWMVANSQNAPQVMSGDPIWTFPTQVSNSGLYRGTVSSGLHFMNFPTPMALLTSQQLGSSGGGGSVNESHLNMIAGLGSYRPVIGVSESSQASGSHQHHRDGTDDRHDSTSHHS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04249 438 MobiDBLite consensus disorder prediction 257 275 - -
Arst1g04249 438 ProSiteProfiles TCP domain profile. 110 164 IPR017887 -
Arst1g04249 438 MobiDBLite consensus disorder prediction 412 438 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 257 298 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 22 36 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 418 438 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 37 97 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 216 235 - -
Arst1g04249 438 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 422 IPR005333 GO:0003700
Arst1g04249 438 Pfam TCP family transcription factor 108 248 IPR017887 -
Arst1g04249 438 MobiDBLite consensus disorder prediction 1 124 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 277 292 - -
Arst1g04249 438 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04249 Arst-Chr1 104966908 104968861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04249 95 380 TCP Transcription Factor Family AT3G47620 48.138 8.48e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst1g04249 TCP 3.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04249 - - gmx:100790785 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04249 1 104966908 104968861 Arst1g04249 1 104966908 104968861 ECH
Arst5g02252 5 43821561 43823833 Arst1g04249 1 104966908 104968861 PCT