Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04237 ATGGGGAGGCCACCTTGCTGTGAGAAAATTGGGATCAAGAAAGGGCCTTGGACTCCTGAGGAAGACATCATCTTAGTCTCTTATATTCAAGAACATGGACCTTCCAATTGGAGATCCGTTCCCACCAATACAGGGTTGATGAGATGCAGCAAGAGCTGCAGGCTTAGATGGACTAATTATCTTCGACCAGGTATCAAAAGAGGTAACTTCACCGACCATGAGGAGAAGATGATTATCCACCTCCAAGCCCTTTTAGGGAATAGATGGGCTGCTATAGCATCCTACCTTCCACAAAGAACAGACAATGATATTAAGAATTACTGGAACACGCATCTGAAGAAGAAGCTCGCCAAGAATCAAAGCGGAGCGGCCGAAGACGGCGGCGACTACCAAGATGGAAACTCTTCAAGATCCCAGCCAAAGGGACAGTGGGAGAGAAGGCTTCAGACAGATATTCACATGGCCAAACAAGCCCTGTCTGAAGCCTTGTCCCTCAGCAAATCCTCCAATAATAACAACAATGTCTTATCTGAGTCCTCATCATCTTATGATGCTTCCAAATTTGTCACAAGAACAAGCCACGCTGCTTCTTCTTCTTCTTCTTCGTACGCCTCAAGCTATGAAAACATATCAAAATTGCTGGAGAATTGGATGAAATCCCCGAACTCGTGTGCTGAAATGACCACGAATTCGGGAAATTCATTTAGTTCTAATAACAGCGAAGCAGATCATGGCTTTGATTCTCTCTTGAGCTTCAAATCCGACGATGAAAGGAAACCAAAGTACTTGTCCTCATCAGAGGCGCAGCAACAGGTGCCTCTAACGTTGCTCGAGAAGTGGCTCTTTGATGATGGTGCTGCTCAGTGCCATGAAGATCTTATGAACATGTCATTGGAGGAAAGTACTTCAGGTTTGTTCTAG 921 0.4517 MGRPPCCEKIGIKKGPWTPEEDIILVSYIQEHGPSNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLAKNQSGAAEDGGDYQDGNSSRSQPKGQWERRLQTDIHMAKQALSEALSLSKSSNNNNNVLSESSSSYDASKFVTRTSHAASSSSSSYASSYENISKLLENWMKSPNSCAEMTTNSGNSFSSNNSEADHGFDSLLSFKSDDERKPKYLSSSEAQQQVPLTLLEKWLFDDGAAQCHEDLMNMSLEESTSGLF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04237 306 CDD SANT 69 112 IPR001005 -
Arst1g04237 306 CDD SANT 16 61 IPR001005 -
Arst1g04237 306 Gene3D - 69 141 - -
Arst1g04237 306 FunFam MYB-related transcription factor 13 66 - -
Arst1g04237 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst1g04237 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst1g04237 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Arst1g04237 306 FunFam Transcription factor MYB30 68 126 - -
Arst1g04237 306 Gene3D - 13 66 - -
Arst1g04237 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 238 - -
Arst1g04237 306 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst1g04237 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Arst1g04237 306 SMART sant 66 114 IPR001005 -
Arst1g04237 306 SMART sant 13 63 IPR001005 -
Arst1g04237 306 MobiDBLite consensus disorder prediction 118 146 - -
Arst1g04237 306 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst1g04237 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04237 Arst-Chr1 104789466 104791012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04237 1 306 MYB Transcription Factor Family AT5G62470 53.221 9.22e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst1g04237 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04237 K09422 - gmx:100799402 395.971