Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04219 ATGGAAAAAGTGGCATCATTGGTGTTGAAGGAAGAGGAGCAGATGGATTTGCCACCGGGGTTTCGGTTTCACCCAACTGATGAAGAGCTCATAACCCATTACCTATACAAGAAAGTTATTGACACCAACTTCGCCGCGAGAGCCATTGGCGAAGTCGACCTTAACCGCTGCGAGCCTTGGGATTTGCCATGGAAAGCGAAAATGGGAGAGAAAGAATGGTATTTCTTCTGTGTGAGGGATAGGAAGTATCCGACCGGGTTGAGGACAAACCGGGCGACCGAGTCTGGGTACTGGAAGGCAACCGGGAAAGACAAGGAGATTTTTCGAGGCAAATCGCTCGTCGGAATGAAGAAAACGCTTGTCTTCTACAAAGGAAGAGCACCAAAAGGAGAGAAAACAAACTGGGTCATGCACGAGTTCAGGCTGGAGGGGAAATTCTCCATCCATAACCTCCCAAAAACCGCAAAGAACGAGTGGGTGATTTGCAGGGTGTTTCGGAAGAGTTCAGCTGGCAAGAAGGTTCACATCTCTGGAATCATGAGGCTCGACACTTTCCGAACCGAATTGGATTCTTCCGGTCTACCTCCCTTGACGGAGACCTCGCCCTCTTTCGACACCATCCATGACGAATCGCCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCCAAGAAACCAAGCCGCAGGCGGAAGCGGAGGAGGAGGAGGAGTCTTTGGTGGTTCCTTCCCCAACAACTCCTCCTCTTCTGTTCCCGCCTATGCGGTTTCTTCCAACATTCTCCCAAGGATGCCGATTTGCGGCGGTTCCTTGTACTCTACTCAACATCAAGATCAGAGTATCCTGAGGGCGTTGTATGAATCGAACGAAAGGGAAATGATCAGTGTGTCACAGGAAACAGGCCTCACTACTGAGATGAACGTGGAAACCAATTCCGTGGTGTCCAATTTTGATTTAGGGAGGGCTCACTTTGAGAGTTTGTGGAATTACTGA 993 0.4965 MEKVASLVLKEEEQMDLPPGFRFHPTDEELITHYLYKKVIDTNFAARAIGEVDLNRCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLEGKFSIHNLPKTAKNEWVICRVFRKSSAGKKVHISGIMRLDTFRTELDSSGLPPLTETSPSFDTIHDESPYVPCFSNPIDVPRNQAAGGSGGGGGVFGGSFPNNSSSSVPAYAVSSNILPRMPICGGSLYSTQHQDQSILRALYESNEREMISVSQETGLTTEMNVETNSVVSNFDLGRAHFESLWNY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04219 330 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Arst1g04219 330 FunFam NAC domain-containing protein 100-like 26 171 - -
Arst1g04219 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 252 - -
Arst1g04219 330 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Arst1g04219 330 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Arst1g04219 330 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04219 Arst-Chr1 104534213 104535743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04219 15 325 NAC Transcription Factor Family AT5G07680 58.255 8.26e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst1g04219 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04219 - - gmx:100170719 458.373