Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04217 ATGTATGATATGCCAAATTTTATTGTGAAAATTAACAATGGGAAGGTAAGGACAACTGCTCATAAGTACAAGCTTAGCTTCTATACAAAGACAGACGTGGAAGTCCTTCCAATTGAGACTTTCGCTTTTAACCCATTCAAAATGTGCCCATTTGCTGAACTTGAGGCAAATGCTCTAATGGATAAAAATTTGTTGTTTGATTACATAGGAAAGGTTGTTGGAAAGAAAGAAGCTATGGGGATGATTACACGCACGAGTGAAGAAAGCAAGCGTATTGCACTACAATTGAAAGACCTAGAGCATATGCTGGATATTAAGTGTCCAAAAATACTGTTAGAGTTGTATTATGCCTTTCATTCCAAGAAACACAAGATTAAATGTACATTGTTTGGGAAATCGGTGGACCAAGTGCTTCCACACTTCGAACGAGATGATGGGGAGCCTTTCATAATGTTTGTTCAGCTTTTTAAGTCGAATGTATACTTAAATTCTATGAATGTTCAAAGCACTTACTATGTCTCCAAATGTTACTTCAATCCAAACCTTCCCGAAGTTATTGACTTCAAGAAAAGATTTGCAAAGGAGGAAACCTCCTACTGGATTGTGGAAAATATTGTGTCTTTAAAGGTTGGTAAAGATGACTGGTCCTATACGCCATGTAAGACATGTCCAGAGAAAGTTCTAGAGAGCAAAAATAGGTATTGGTGTGATCATTGTAGACGTGTAGGCTTTAAGGCTACACTAAGGTATAAGCTACAAGTAATCGTGACTAATGAAAATGGTTGTATGAAGCTCTTTCTGTGGAACAAAGAAACAGAGCATATGGTGGGAAAGACTGCTGAGATAATTAAAGAGTTATTCCTTAACATCACCTACAAGAATATTAATGTCGTGGAAGGGGTATACAGCGTTTTAAAGATTTCAGATGATGAATGCCTCATGTCCAGTTTTGGTTCTGCCAATTCTTCTTTTGATGCTTCTTGTTCTCAACATGTACCTAATACCTCTACAACTGAAATAGGTGATAATAGCAATGGACATGGGGCTGTTTCTCTATCCAAGGATTTAGCAGTTGAGGGCAATGGTGAGAGATCCTCTGAGACTCCAGCCAAGAGGTCCTCCCCTAATACAGGTGATGGCTCTACGGCAGAAGCAAGTGTGTCTGCAGATGTGCAAGCATCAATTAACAAGAATTTTAAGAGGAATTGTGGAAAAAAAATCTCGATTGAAAACTTTTGA 1239 0.381 MYDMPNFIVKINNGKVRTTAHKYKLSFYTKTDVEVLPIETFAFNPFKMCPFAELEANALMDKNLLFDYIGKVVGKKEAMGMITRTSEESKRIALQLKDLEHMLDIKCPKILLELYYAFHSKKHKIKCTLFGKSVDQVLPHFERDDGEPFIMFVQLFKSNVYLNSMNVQSTYYVSKCYFNPNLPEVIDFKKRFAKEETSYWIVENIVSLKVGKDDWSYTPCKTCPEKVLESKNRYWCDHCRRVGFKATLRYKLQVIVTNENGCMKLFLWNKETEHMVGKTAEIIKELFLNITYKNINVVEGVYSVLKISDDECLMSSFGSANSSFDASCSQHVPNTSTTEIGDNSNGHGAVSLSKDLAVEGNGERSSETPAKRSSPNTGDGSTAEASVSADVQASINKNFKRNCGKKISIENF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04217 412 Pfam Replication factor-A C terminal domain 209 286 IPR013955 -
Arst1g04217 412 SUPERFAMILY Nucleic acid-binding proteins 184 287 IPR012340 -
Arst1g04217 412 MobiDBLite consensus disorder prediction 358 388 - -
Arst1g04217 412 Gene3D - 180 308 IPR012340 -
Arst1g04217 412 MobiDBLite consensus disorder prediction 367 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04217 Arst-Chr1 104493683 104495875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04217 217 286 Core DNA Replication Machinery Family AT5G08020 36.620 4.41e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04217 - - adu:107470765 841.647