Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04198 ATGGCGCGGGAGATAATGATTCTAAGAAGGCTTGATCATCCCAACATCATCAAATTGGAGGGCTTGATTACTTCCAGGTTGTCTTGTAGCATCTACCTTGTGTTTGAGTACATGCAACATGACATCACAGGGCTATTGTCTAGACCAGAAATCAAGTTTAGTGAATCACAGATTAAATGCTACATGAAACAGTTGTTATCTGGTCTTGAGCATTGTCACTCGAAGGGTGTGATGCACCGAGACATCAAGGGATCGAATCTTTTGGTGAATGATGAAGGCATATTGAAGGTGGCAGATTTTGGATTGGCAAACTGGTGCAATTCAGGAAACAAGCAGCCCCTCACAAGTCGTGTTGTCACCTTGTGGTACCGTCCGCCAGAACTCTTGCTCGGCTCGACAGATTATAGCCCATCTGTGGATCTCTGGAGTGTTGGCTGTGTATTTGCAGAGCTACTTATTGGAAAGCCTATACTTCAGGGAAGAACTGAGGTTGAACAATTGCATAAAATCTTCAAGCTCTGCGGCTCTCCACCTGATGACTACTGGAAAAAGACCAAACTTCCTCATGCAACTTTGTTCAAGCCACAACAACCATACGATAGTAGCCTCTGGGAGACGTTTAAAGATTTGCCTGCGACCAGCATAAATGTGCTACAAACGCTTCTTTCTGTCCAACCGAGCAAACGTGGGACTGCCACATCTGCTCTCTCATCAGAGTACTTCAAAACAAAACCATATGCATGTGATCCATCAAGCATGCCAATATACCCACCTAGCAAGGAGATTGACGCAAAGCACCAGGAGGAGTCAAAAAGGAAAAAGATTAGCGGCCGAGCTTGTAGAGCAGAATCACGAAAACCATCAAGAAAGCCACTAGCACTCAGTAAATTAGCCCCAGCTGAGGATTTGACAAGTCAAATTCAAACTTCCCAAAGACAAAAAGTTGATGATAGCTCTTGCCAAGTCCTTAAAGAAGAGAACATTGACATAGATGAGGAGGCACCAAAGCTATCTAGTGATAAACCACAAGAACAAGATGGTTCCCATATGAAGGATGAAACAAAAGTAGATATTCCCTTTCCAGGACCATTGCAAGTTTCAAAATCAAGTGGCTTTGCATGGGCGAAAAGGCGTAAAGATGACACCTCAATTAGAGCACATTCTCGATCAATTTCAAGAGGGCACTTGTATAATTCCTTAGAAACTTCGACAGTAACTTCAAGGAATAATTCTGAATCCAGAAACTATGAAAACAAGGAATTCTGTGGAGGACGCTCCAACTCTAGGGGCCGTGATCTACTTGAAATTTCTAAGCTTGTAATGCAGAACCAGTGGAATAAGTTTGATCGTCCCGACTCATTTGATACTTCTGATGAGTACCATTCACAAGAACTATCTATGACACTTTATCACAGAGAAGACTCATTATCCAAGAGAAGTAACCTGAGTTCACAGGACCAAGGAGACACAGTTGATTTTTCAGGACCCTTAATATCTCAAATGCACACCGTCGATGAGATCTTAGAAAGACATGAGCGACACATACGGCGTACTGTCCGGCGATCGTGGTTTCAGAAAGATAAGAAGAATGGGAAGTAA 1599 0.4296 MAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMQHDITGLLSRPEIKFSESQIKCYMKQLLSGLEHCHSKGVMHRDIKGSNLLVNDEGILKVADFGLANWCNSGNKQPLTSRVVTLWYRPPELLLGSTDYSPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKTKLPHATLFKPQQPYDSSLWETFKDLPATSINVLQTLLSVQPSKRGTATSALSSEYFKTKPYACDPSSMPIYPPSKEIDAKHQEESKRKKISGRACRAESRKPSRKPLALSKLAPAEDLTSQIQTSQRQKVDDSSCQVLKEENIDIDEEAPKLSSDKPQEQDGSHMKDETKVDIPFPGPLQVSKSSGFAWAKRRKDDTSIRAHSRSISRGHLYNSLETSTVTSRNNSESRNYENKEFCGGRSNSRGRDLLEISKLVMQNQWNKFDRPDSFDTSDEYHSQELSMTLYHREDSLSKRSNLSSQDQGDTVDFSGPLISQMHTVDEILERHERHIRRTVRRSWFQKDKKNGK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04198 532 MobiDBLite consensus disorder prediction 261 290 - -
Arst1g04198 532 Pfam Protein kinase domain 2 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04198 532 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04198 532 MobiDBLite consensus disorder prediction 480 496 - -
Arst1g04198 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Arst1g04198 532 SUPERFAMILY Protein kinase-like (PK-like) 2 248 IPR011009 -
Arst1g04198 532 SMART serkin_6 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04198 532 PANTHER CELL DIVISION PROTEIN KINASE 2 245 - -
Arst1g04198 532 MobiDBLite consensus disorder prediction 318 356 - -
Arst1g04198 532 Gene3D Transferase(Phosphotransferase) domain 1 40 280 - -
Arst1g04198 532 MobiDBLite consensus disorder prediction 402 427 - -
Arst1g04198 532 MobiDBLite consensus disorder prediction 252 362 - -
Arst1g04198 532 MobiDBLite consensus disorder prediction 301 317 - -
Arst1g04198 532 FunFam probable serine/threonine-protein kinase At1g54610 40 280 - -
Arst1g04198 532 FunFam Putative serine threonine-protein kinase 1 44 - -
Arst1g04198 532 Gene3D Phosphorylase Kinase; domain 1 1 39 - -
Arst1g04198 532 MobiDBLite consensus disorder prediction 476 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04198 Arst-Chr1 104239505 104243709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04198 3 301 Core Cell Cycle Gene Families AT5G10270 46.815 3.83e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Arst1g04198 Pkinase 4.5e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04198 - - adu:107468284 1055.43