Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04195 ATGGCTTCTTGCAATTACTTCTTCAACCCTCAACAAATAGATGAATATCCTTTCCCTCTTCCCATTCAATGTTCCTTATATGATTATGATTATTACTATTATTCCAGTGAAAACACTAACGAATATCCACCACTGGGATGTTGGGCACACGAGTTTTCAATACAAGACATGGAGTGTTACCCTTCACTTCCTTTTTATGAAACTCTCTCCATCGAACCAATTTCAACTATTAAAGACTATGACTTTTATGATATTAAGGAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCAGAAAAAGTTTCATCATCATCATCACTTTCCAACAACAACAACAATGAAGAAAATAAGAGCATCAGGAGGGTCATTAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCAAGGAAGATGATATCGGATTATTTCTACATGCCGATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACACTTTTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCTCATCGGAAACTTATGAGTCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAGTGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGACTTAGACAAGCATGTTTCAAGGCCAACTACAAGAAGAGGAAGCTAATAATGGGTAGTAGTTCTTCAAATTCATCCATGGAATCTTCTTCATCATATAACATTATTGGACATAATGCAACAAGAATAACTAGTAGTAAGGGAGACACGATGGATAGTGTTGGATTTATTAGCTTTGAGGATGAAGAAGATCAAGAACGTGACATCAAATATGCGTTGTCTTTGCCTCCTTTGTCCCATAACATTCAAATGGTCTAG 978 0.3804 MASCNYFFNPQQIDEYPFPLPIQCSLYDYDYYYYSSENTNEYPPLGCWAHEFSIQDMECYPSLPFYETLSIEPISTIKDYDFYDIKEGFSVWNEVDAGFDCSEKVSSSSSLSNNNNNEENKSIRRVINKRVCREERSSNSTKMLSRKMISDYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRSAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLIMGSSSSNSSMESSSSYNIIGHNATRITSSKGDTMDSVGFISFEDEEDQERDIKYALSLPPLSHNIQMV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04195 325 ProSiteProfiles RWP-RK domain profile. 127 211 IPR003035 -
Arst1g04195 325 Coils Coil 203 230 - -
Arst1g04195 325 Pfam RWP-RK domain 144 191 IPR003035 -
Arst1g04195 325 PANTHER PROTEIN RKD4 118 292 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04195 Arst-Chr1 104195228 104196877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04195 130 255 AtRKD Transcription Factor Family AT1G18790 69.531 7.64e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst1g04195 RWP-RK 2.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04195 - - ahf:112774246 487.648