Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04185 ATGACAGAGAAGAAAACATATTCTTTTTGTGGCTTCCTATTGCTTTCTCTCTTCGTCCTTCTTTCAGTTGAAGTTATTGTTGGTGAGGATTCTTTGGAAACTGATAAACAAGTTCTTTTGGAGTTGAAAGCATATCTTGATAGCAAAACATTTGAAGACCATGGAAATTATGTGTATTGGAACAGAAGCACTAGTCCATGTGAATGGCCAGGAATATGGTGCACCCACATCAATGGAACCACCAATAGGGTGGTTGGAATAGACCTCTCCGGCAGCGAAATCACCGGCGAGATTTTCAACAACTTCTCAATGCTAACTGAGCTAACACACCTTGATCTGTCTCAGAACACACTCTTCGGTGACATTCCTGAAGATCTAAGGCATTGCCAGAAGCTCATTCATCTCAACATCTCACATAACATTCTTGCTGGTGAGTTGAACTTGACAGGTTTCAGAACATTGAAGACTCTGGACTTGTCTGTGAATAGGCTTTATGGCGAGATTGGCGTGAATCTTTTCGCCAGCGCCTGCAATGCCTTGGTTACTCTCAATGTCTCAGGGAATAACTTGACTGGTGGAATTGGTGGCTGGCTTGATCAGTGTCCTATGCTGCAGAACTTGGATTTGAGCACAAACAATCTGAGTGGAGGATTAGGGAACGGTTTCGCTAGGCTGAAGGAGTTTTCGGTTGCAGAAAATCATCTCAGTGGGAATGTTTCATCAGAGGCTTTTCCCCTGGATTGTAGCCTTGTGGAACTAGACCTTTCGCTGAATGGTTTCGTTGGCGAGGCGCCAAAGGGTGTTGCAAACTGCAAGAATCTAACAATTCTGAATCTTTCCAGCAACAATTTCTCTGGTGGAATCCCAATTGAGATAGGATCAATCTCAGGCCTAAAAGGATTGTACTTGGGGAACAATAGCTTCTCAAGAGATATACCTCAGAGTCTTTTGAATCTTGCCAATTTGGTTCTTTTGGATTTGAGCAGAAACAATTTTGGTGGGGAAGTTCAAGAAATTTTTGGGGAATTTAAGCAACTGAGCTTTCTTGTGTTGCACTCAAATCACTACACTGGAGGATTGATTTCCTCAGGGATCCTTAAACTGCCAAAAGTTTCGCAGTTAGATCTAAGCTTCAACAACTTTTCAGGTCCATTGCCTGTTGAGATCACTCAGATGGCAAGCCTTCAGTTCTTGATGTTGTCCTACAACCAGTTCAGCGGTCCAATTCCGGCTGAATTTGGAAACATGGCTCACCTTCAAGCACTAGACCTTGCCTACAACAATCTGAATGGTTCAATCCCACCAAGCCTTGGCAAAATGAGTTCCCTCTTATGGCTAATGCTGGCGGATAATTCGCTAAGCGGCGAAATCCCACCGGAGTTGGGAAACTGCACAAGCTTGTTATGGTTGAACCTTGCAAACAACAAGCTGAGTGGGAATTTGCCTCCTGAGTTGTCCAAGATTGGAAGGAATGCAATGACAACATTCGAATTGAATCGAAAAAGTGAGCAAATCCTTTCTGGCTCAAGTGAGTGCCTTGCAATGAGAAGATGGATGCCGGCAGATTATCCTCCATTCAGCTTTGTGTATAGTATCTTGACAAGGAAGAATTGTAGGGGACTCTGGTACAAACTCCTCACAGGAAATGGCATTTTCCCATTTTGCCCCCCGGGCGCCTCGCTTAGCAAGCCTCAGATATCAGGCTATGTTCAGCTGAGTGGGAACAATCTTTATGGAGAGATTCCTTCAGTGATTGGAACAATGGTGAATTTCAGCATGCTGCATTTGGGATTCAACAATTTCTCTGGAAAGTTCCCTGCTGCAATGGGTACCATGTCACTTGTGGTTTTAAACATCACCATGAACAAATTCTCAGGTGAAATTCCAAGTGAAGTTGGAAACATGAGATGCCTTCAGAATCTTGATTTTTCTTCCAACAATTTCTCAGGGCAATTTCCAACAAGTCTGAACAGTTTAACTGAGCTTAACAAGTTCAACATATCATTCAATCCCTTAATAACTGGTGTAGTTCCATCAACTGGACAATTTGTTACATTTGACATGAATTCATATCTAGGTGACCCTCTATTAGTCCTTCCAAACTTCATTTACAACATCACAGGTGATAAGAACACAACCTTGCACAAATACCATAAGAAGAAGGAATCAAAGTTGTCTGTGTTCTTGGGTTTTGCAGCTATAACACTGGCTTTCATGGTGTTTGGCCTTCTTACAATTATAGTCTGTGCATTGAGGAAAAGTCCCTTGGAAGATCCTGGATACCTCTTGAGGGAAGCTAAACAATCTCATGATTCAAGCAGCTCTGCATCTTCACCATGGTTATCGGACACGGTCAAGGTAATCCGGTTAAACAAGACGGCTTTTACACACGACGATATCTTGAAGGCCACTGGAAACTTCTCAGAGGACAGGATCATAGGAAAAGGAGGATTCGGAACGGTTTACAAGGGAGTTTTTCAAGATGGAAGAATTGTTGCAGTGAAGAAGCTTCAAAGAGAAGGAATTGAAGGCGAAAAGGAGTTTAGAGCAGAAATGGAAGTTCTGAGTGGTCATGGATTTGGTTGGCCTCATCCAAACCTTGTCACGCTCTATGGATGGTGCTTAAATGGTTCAGAAAAGATACTAGTTTATGAGTACATAGAAGGTGGAACATTGGAGGATCTAATCACTGATAGAACAAGTTTTACATGGAGAAGAAGATTAGAAGTTGCAATTGATGTTGCAAAAGCACTAGTCTATTTGCACCATGAATGTTACCCTCCAATTGTTCATAGAGACGTTAAAGCTAGCAATGTGTTATTGGAAAAAGATGGAAAAGCAAAAGTCACAGATTTTGGATTAGCAAGAGTTGTTGATGTTGGAGATAGCCATGTTAGTACAGTGGTGGCTGGAACAGTTGGTTATGTTGCACCAGAATATGGACAAACATGGCAGGCTACAACAAAAGGTGATGTGTATAGTTTTGGAGTGCTGGCTATGGAGTTGGCCACAGGGAGAAGAGCAGTGGATGGAGGTGAAGAGAGCTTGGTGGAGTGGGCGTGGCGTGTCGTCGGACGCGGACGGCTCGGCCGGGCCCTACCGGTTTCAGTGATGGGGTCAGGGCTTGTTGGTGGTGCAGAAGAGATGAGTGAAGTGCTTAGAATTGGTGTGAAGTGCACTGCTGAGGCACCATATGCTAGGCCTAATATGAAGGAAGTTCTTGATATGTTGATTGGGATATACTACTCCAAAGGTTATCCTTCAAGCCATGGAATCATTGTTTAG 3285 0.4317 MTEKKTYSFCGFLLLSLFVLLSVEVIVGEDSLETDKQVLLELKAYLDSKTFEDHGNYVYWNRSTSPCEWPGIWCTHINGTTNRVVGIDLSGSEITGEIFNNFSMLTELTHLDLSQNTLFGDIPEDLRHCQKLIHLNISHNILAGELNLTGFRTLKTLDLSVNRLYGEIGVNLFASACNALVTLNVSGNNLTGGIGGWLDQCPMLQNLDLSTNNLSGGLGNGFARLKEFSVAENHLSGNVSSEAFPLDCSLVELDLSLNGFVGEAPKGVANCKNLTILNLSSNNFSGGIPIEIGSISGLKGLYLGNNSFSRDIPQSLLNLANLVLLDLSRNNFGGEVQEIFGEFKQLSFLVLHSNHYTGGLISSGILKLPKVSQLDLSFNNFSGPLPVEITQMASLQFLMLSYNQFSGPIPAEFGNMAHLQALDLAYNNLNGSIPPSLGKMSSLLWLMLADNSLSGEIPPELGNCTSLLWLNLANNKLSGNLPPELSKIGRNAMTTFELNRKSEQILSGSSECLAMRRWMPADYPPFSFVYSILTRKNCRGLWYKLLTGNGIFPFCPPGASLSKPQISGYVQLSGNNLYGEIPSVIGTMVNFSMLHLGFNNFSGKFPAAMGTMSLVVLNITMNKFSGEIPSEVGNMRCLQNLDFSSNNFSGQFPTSLNSLTELNKFNISFNPLITGVVPSTGQFVTFDMNSYLGDPLLVLPNFIYNITGDKNTTLHKYHKKKESKLSVFLGFAAITLAFMVFGLLTIIVCALRKSPLEDPGYLLREAKQSHDSSSSASSPWLSDTVKVIRLNKTAFTHDDILKATGNFSEDRIIGKGGFGTVYKGVFQDGRIVAVKKLQREGIEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILVYEYIEGGTLEDLITDRTSFTWRRRLEVAIDVAKALVYLHHECYPPIVHRDVKASNVLLEKDGKAKVTDFGLARVVDVGDSHVSTVVAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAVDGGEESLVEWAWRVVGRGRLGRALPVSVMGSGLVGGAEEMSEVLRIGVKCTAEAPYARPNMKEVLDMLIGIYYSKGYPSSHGIIV 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04185 1094 Gene3D Ribonuclease Inhibitor 325 515 IPR032675 -
Arst1g04185 1094 Gene3D Transferase(Phosphotransferase) domain 1 887 1086 - -
Arst1g04185 1094 Pfam Leucine Rich repeat 271 286 IPR001611 GO:0005515
Arst1g04185 1094 SUPERFAMILY L domain-like 256 674 - -
Arst1g04185 1094 FunFam Leucine-rich repeat receptor-like protein kinase 887 1088 - -
Arst1g04185 1094 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 504 - -
Arst1g04185 1094 SMART LRR_typ_2 105 129 IPR003591 -
Arst1g04185 1094 SMART LRR_typ_2 151 175 IPR003591 -
Arst1g04185 1094 SMART LRR_typ_2 416 439 IPR003591 -
Arst1g04185 1094 SMART LRR_typ_2 392 415 IPR003591 -
Arst1g04185 1094 SMART LRR_typ_2 319 342 IPR003591 -
Arst1g04185 1094 SMART LRR_typ_2 440 464 IPR003591 -
Arst1g04185 1094 Gene3D Phosphorylase Kinase; domain 1 768 886 - -
Arst1g04185 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Arst1g04185 1094 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 242 336 - -
Arst1g04185 1094 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 248 1079 - -
Arst1g04185 1094 Pfam Protein kinase domain 808 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04185 1094 ProSitePatterns Protein kinases ATP-binding region signature. 813 836 IPR017441 GO:0005524
Arst1g04185 1094 Gene3D Ribonuclease Inhibitor 533 713 IPR032675 -
Arst1g04185 1094 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Arst1g04185 1094 SUPERFAMILY Protein kinase-like (PK-like) 789 1078 IPR011009 -
Arst1g04185 1094 SUPERFAMILY L domain-like 61 355 - -
Arst1g04185 1094 ProSiteProfiles Protein kinase domain profile. 807 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04185 1094 CDD STKc_IRAK 813 1080 - -
Arst1g04185 1094 Pfam Leucine rich repeat 152 214 IPR001611 GO:0005515
Arst1g04185 1094 Gene3D Ribonuclease Inhibitor 32 316 IPR032675 -
Arst1g04185 1094 Pfam Leucine Rich Repeat 108 129 IPR001611 GO:0005515
Arst1g04185 1094 SMART serkin_6 807 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04185 1094 FunFam serine/threonine-protein kinase BRI1-like 2 767 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04185 Arst-Chr1 104036582 104040383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04185 55 1077 Receptor kinase-like Gene Family AT1G55610 32.451 8.81e-152 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Arst1g04185 Pkinase 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04185 - - gmx:100783886 1581.23