Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04156 ATGGAGAAGCCACCGGAGAATCAGTCCAGTCACTTGAAAAATAACTCCTCCACCACCGCCAACCACAACAAGCAAGAAGGAGTGAATAACAATGGCAACCGAACAAAGTACCGTGGCGTGAGGCAGAGGCAGTCAGGCCGTTACACGGCGGAGATAAGAGACCCTCAGTCCAAGAAGCAGCGGTGGCTGGGCACCTACACCACACCGGAGGAAGCTGCTCGTGCCTACGATGCCGCCGCCCGAGCCCTTCGCGGCCATAAGGCCTGGACCAATTTCCTTGATTACCCTACTAATAACAACAACGACCTCGAAAACCCTAACCCTTTTTTGTCTTTTTCTTCCTCCTCAAACATACTTCTTCTCCGGTTTCTTCTGGACTTCATCAACTCCTCCTCCAACCCCTCTCTGGTCTTTTCCGCTCAGCAACTCTACGATCAGTTGTTGCTGAACGGAATAAGCAGCAGCAGCAGCAACAACAATAATAATAATAATAACTGCAGATTAACAGAGACAGTGTTCTCTCACGAGATGATGAGGAACGGTAATTATAATAACTCGGGTGTCCTTTTTGGTCATTTTCCCATGCAAACTGATTTTGATGGTGACTTTAATAATAATAACTTTAGTAGTAGTAATGTGGTTGACAATGGTCATTTGATGGAAGAAGGAAGTGTGTTTCAGTTCCCTGAGATTCATAATCATCATCCTCATGATGAGGAGGATCTTCTTGCGGCATTCTGGATCGATGAACACTACTAA 759 0.4625 MEKPPENQSSHLKNNSSTTANHNKQEGVNNNGNRTKYRGVRQRQSGRYTAEIRDPQSKKQRWLGTYTTPEEAARAYDAAARALRGHKAWTNFLDYPTNNNNDLENPNPFLSFSSSSNILLLRFLLDFINSSSNPSLVFSAQQLYDQLLLNGISSSSSNNNNNNNNCRLTETVFSHEMMRNGNYNNSGVLFGHFPMQTDFDGDFNNNNFSSSNVVDNGHLMEEGSVFQFPEIHNHHPHDEEDLLAAFWIDEHY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04156 252 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 153 - -
Arst1g04156 252 SMART rav1_2 36 100 IPR001471 GO:0003700|GO:0006355
Arst1g04156 252 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
Arst1g04156 252 MobiDBLite consensus disorder prediction 1 63 - -
Arst1g04156 252 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Arst1g04156 252 Pfam AP2 domain 35 86 IPR001471 GO:0003700|GO:0006355
Arst1g04156 252 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Arst1g04156 252 FunFam Ethylene-responsive transcription factor 2 35 94 - -
Arst1g04156 252 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Arst1g04156 252 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Arst1g04156 252 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Arst1g04156 252 MobiDBLite consensus disorder prediction 8 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04156 Arst-Chr1 103641061 103641819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04156 35 156 AP2-EREBP Transcription Factor Family AT1G12980 48.062 1.30e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst1g04156 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04156 - - aip:107611489 412.149