Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04118 ATGTCATCATCACAACTATGCTCTATGCTTCTCCCACCTTCACTTTGTTTTGCATCACTCAACTTTCATGTCTTCCTTTCTCTCCTTCTATTGCTTCTTGTTTTCAACTTTTGGTTGGTCCCTGGTGGTCTTGCTTGGGCTCTCTCCAAGTTCCGTTTAGAATCACCACGTGCCGATAATACTAATAACAACAACAAAAGATCGATTCCTGGACCTTCAGGTCTTCCAGTTCTTGGCCTTGTTTCGGCCTTCACTGGAACCTTAACTCACAGGGTTCTGGCTAACTTGGCCGAAACATTTAAGGCCAAGAACTTGATGGCATTTTCCATTGGGGTGACCCGGTTTGTTATCTCCACAAACCCTAACACGGCCAAAGAGATTCTTAACAGTTCAGCTTTCGCTGATCGACCTATCAAAGAATCAGCTTACGAGCTTCTCTTCCACCGTGCAATGGGGTTCGCTCCTTATGGCGAATACTGGAGGAACCTTAGAAGAATCGCCACCGTTCATTTGTTCTCTCCACGGAGGATCGCTGCTAGCGGTGAGTTCAGAGCTAGAGTTGGTGAGCACATGGTGAAAGAAATGGTTGGTTTGATGGAGAAGAAGAGTGAGGTTAAGGTTAGAGAGGTGTTGCATTTAGGATCGTTAAACAATGTGATGATGAGTGTGTTTGGGAAAAGCTATGAGTTTGGTGAAGGTGGTAATGGGTGTAAGCTTGAAGAGTTGGTGAAAGAAGGGTATGATCTGCTTGGTGTTTTTAATTGGAGTGACCACTTCCCTTTCTTGGGTTGGTTGGATTTGCAAGGTGTCAGAAAGAGGTGTAGGAATCTAGTAGCGAAAGTGGATGATTTTGTTGGAAATATCATATTGGAACATAGAATGAAAAGGGTTGCCAAGGATGAAGCCTTTGATGACTTTGTTGACGTGTTACTAGATTTGGAAAAACAGAGCAAGCTTCAGCACTCTGATATGGTTGCTATTCTTTGGGAAATGATATTTAGAGGGACTGATACAGTAGCAATTCTTTTGGAATGGATTCTAGCAAGGATGGTATTGCACCCTGAAATCCAAGCAAAAGCTCAATCTGAAATTGACTCTGTAGTTGGGTATGATCGTACAATCAATGATTTAGATCTTCAAAATCTACCATACCTACGTGCCATAGTGAAGGAAACCCTAAGAATGCACCCACCAGGCCCACTGCTATCATGGGCGAGGCTTGCAATCCACGACACACAAGTGGGCCCCCACATGATTCCAGCTGGCACAACGGCAATGGTGAACATGTGGGGCATCACGCATGACAAAGAAGTTTGGTTTGAGCCAGAAGAGTTCAAGCCAGAGAGGTTCATAGAAGAAGAGGTTCAAATAATGGGGTCTGATCTTAGGGTTGCACCATTTGGTTCTGGAAGAAGGGTGTGTCCTGGCAAAGCTATGGGCTTGGCTACTGTGGAGCTTTGGCTTGCTATATTGCTTCAAACATTCAAATGGATTCCTACAAATCATGTTGACTTATCTGAGTGCTTGGAACTTTCTCTTGAGATGAAGTCACCTCTTCTTGCTAAGCTTATTCCAAGATTTCGTTAA 1587 0.4392 MSSSQLCSMLLPPSLCFASLNFHVFLSLLLLLLVFNFWLVPGGLAWALSKFRLESPRADNTNNNNKRSIPGPSGLPVLGLVSAFTGTLTHRVLANLAETFKAKNLMAFSIGVTRFVISTNPNTAKEILNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRIATVHLFSPRRIAASGEFRARVGEHMVKEMVGLMEKKSEVKVREVLHLGSLNNVMMSVFGKSYEFGEGGNGCKLEELVKEGYDLLGVFNWSDHFPFLGWLDLQGVRKRCRNLVAKVDDFVGNIILEHRMKRVAKDEAFDDFVDVLLDLEKQSKLQHSDMVAILWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVVGYDRTINDLDLQNLPYLRAIVKETLRMHPPGPLLSWARLAIHDTQVGPHMIPAGTTAMVNMWGITHDKEVWFEPEEFKPERFIEEEVQIMGSDLRVAPFGSGRRVCPGKAMGLATVELWLAILLQTFKWIPTNHVDLSECLELSLEMKSPLLAKLIPRFR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04118 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Arst1g04118 528 Pfam Cytochrome P450 70 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 FunFam Cytochrome P450 78A5 61 526 - -
Arst1g04118 528 CDD CYP78 101 519 - -
Arst1g04118 528 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 Gene3D Cytochrome P450 56 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst1g04118 528 PANTHER CYTOCHROME P450 78A7-RELATED 22 526 - -
Arst1g04118 528 SUPERFAMILY Cytochrome P450 69 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04118 Arst-Chr1 103183985 103185879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04118 26 526 Cytochrome P450 AT1G74110 64.729 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04118 K20619 - gmx:100811042 741.495