Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04114 ATGAAGCCTCTTTGGTTACCTACCGGTACCAGTGGATCTGTTGTAGCAACCTTACTCCTGTTACTGTTCTCTTGCACCACATTCACTTCCACAGCTTATGATGCACTTGATCCAACTGCCAATATAACAATCAAATGGGATGTCATAACCTGGACTGGAGATGGCTATATTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATCCAGGCGCCGGGATGGACCTTAGGGTGGACATGGGCGAAAAGGGAAGTAATTTGGAACATGCTTGGAGGCCAAACCACAGAACAAGGGGATTGTTCAAGGTTCAAAGGGAGCATCCCACATTGCTGCAAGAAAGATCCAACTGTAGTGGATTTACTGCCAGGAGCACCTTACAATCAGCAGGTAGCAAATTGCTGCAAAGGCGGCGTCTTGAATGCGTGGGCTCAGGACCCTGAAACTGCAGTTGCTTCGTTCCAACTCATTGTCGGTTCGGCTGGAACAACTAACAAAACTGTTAGAGTGCCAAAAAATTTCACCTTGAGAGTGCCCGGTCCAGGTTATACTTGTGGCCCTGCAAAGATTGTGAGGCCAACAAAATTTAGCACCAATGACAAGAGGAGAACCACTCAAGCCATGATGACTTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACTCCAACTTGCTGTGTTTCTCTCTCATCATTCTATAATAATACAATAGTCAATTGCCCAACTTGTACCTGTGGCTGTCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCAAAGTCTCCGCATTTAGCTTCAGTCGTTTCACCACCAAGCAGAGCTTTGAATCCACCTCTAGTTCAGTGTACAAGCCATATGTGTCCGATTCGAGTGCACTGGCACGTCAAGCTCCAATACAAAGAGTACTGGAGGATCAAGATCACAGTCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTTCAGCATCCCAATTTTGACAATGTGACACAGGTTTTCAGCTTTAACTACAAGCCACTGACACCTTATGAGGGCTTAAGATTATGTATGGGTTTTGCAGATGATACAGGTATGCTGTGGGGTGTGAAGTTCTACAATGATTTGTTGGTTTCAGCTGGAGCAGTTGGGAATGTGCAATCAGAACTGTTATTTAGGAAAGACAAATCAAGCTTCACATTTGATAAAGGATGGGCATTCCCAAGAAGGATCTATTTCAATGGAGACAACTGTGTCATGCCACCTCCAGATGCATATCCTTGGCTACCAAATGCAAGTTCAACACTAGTTCTCTCTTTGCTAAGTTCTCTCACTCGGATTCTGGCTTCTTTTCTTGTCTTATCATTTACATGTTAA 1377 0.4357 MKPLWLPTGTSGSVVATLLLLLFSCTTFTSTAYDALDPTANITIKWDVITWTGDGYIAVVTMYNFQQYRHIQAPGWTLGWTWAKREVIWNMLGGQTTEQGDCSRFKGSIPHCCKKDPTVVDLLPGAPYNQQVANCCKGGVLNAWAQDPETAVASFQLIVGSAGTTNKTVRVPKNFTLRVPGPGYTCGPAKIVRPTKFSTNDKRRTTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCTCGCQNKTEPGSCVDPKSPHLASVVSPPSRALNPPLVQCTSHMCPIRVHWHVKLQYKEYWRIKITVTNFNYRMNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYEGLRLCMGFADDTGMLWGVKFYNDLLVSAGAVGNVQSELLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSTLVLSLLSSLTRILASFLVLSFTC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04114 458 PIRSF COBRA 9 458 IPR006918 GO:0010215|GO:0016020
Arst1g04114 458 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Arst1g04114 458 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215|GO:0016020
Arst1g04114 458 PANTHER PROTEIN COBRA 21 442 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04114 Arst-Chr1 103138735 103142321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04114 15 452 COBRA Gene Family AT3G02210 73.864 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04114 - - gmx:100811581 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04114 1 103138735 103142321 Arst1g04114 1 103138735 103142321 ECH
Arst1g04114 1 103138735 103142321 Arst10g02803 10 94278046 94281055 PCT