Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst1g04093 | ATGCAGGAGATACATTCAATGGGAGGCACCAGGTTCTTCGGCGCCGCTGCTGACAGGAGGCTCAGGCCACACCACCACCACCCTCACCAGAACACCGCTACCAACTGCCACCAGCAGCAAGCACTTAAATGTCCCCGTTGTGACTCACTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCCCAGCCACGCCACTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCTGTCGGCGGCGGTTGCCGCAAGTCCAAGCGTTCCAACGACAACAAGACCGCCAAAACCAGCAAAAATAATAATAGTAATAATAATAGCGCCACCGCAACTTCCTCCGCGGAAACGCCGCCGCAAACGACGTCGTCTCAGGCTCCACCGACGGACCAGAACTCCAATTCTCACTCCAGCAGCGAGAGCTCTAACCTCACCGCGGCGGCGGCGGCGGCGACCATCGGCACGACGGAGCTTAACTCTGATTCTTCCAAGTTGTTGATCCACGAGAATAACAACAACAACGCTTCCTCGAACCCTAATTTGGAGAGCGGTATTTTCTCTGAGATAGGGACGCTGACGAGCTTGATGGCTTCTTCCTCTTCGAACAACGATGCATTGGCGTTTGGATTTGGAGGTGGTGGTGTTGTTCCTGATGCGACGTCGTTTCAGTGGCATCAGCAGCAGAAGTTGCCGGAGAATCTGAACGGTAGTGGTGGGAGCTTGCTGGATCATCATGGACACGGTAGTACTGTAACCGTTGATTTGTCGGCACTTCAGAGCAAGACGGGAAACGGTGGATTTGGACCGTTGGATTGGCAAGCTGGTGTGGATCAAGGTTTGTTTGATCTCCCCAACTCCGTTGATCATGCTTACTGGAGTCAAACTCAATGGCCTGATCACGATAATTCTAATCTCTTTCATCTCCCCTGA | 951 | 0.5342 | MQEIHSMGGTRFFGAAADRRLRPHHHHPHQNTATNCHQQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNDNKTAKTSKNNNSNNNSATATSSAETPPQTTSSQAPPTDQNSNSHSSSESSNLTAAAAAATIGTTELNSDSSKLLIHENNNNNASSNPNLESGIFSEIGTLTSLMASSSSNNDALAFGFGGGGVVPDATSFQWHQQQKLPENLNGSGGSLLDHHGHGSTVTVDLSALQSKTGNGGFGPLDWQAGVDQGLFDLPNSVDHAYWSQTQWPDHDNSNLFHLP | 316 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst1g04093 | 316 | MobiDBLite | consensus disorder prediction | 86 | 155 | - | - | |
Arst1g04093 | 316 | ProSitePatterns | Zinc finger Dof-type signature. | 44 | 80 | IPR003851 | GO:0003677|GO:0006355 | |
Arst1g04093 | 316 | ProSiteProfiles | Zinc finger Dof-type profile. | 42 | 96 | IPR003851 | GO:0003677|GO:0006355 | |
Arst1g04093 | 316 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 31 | 197 | IPR045174 | GO:0003700|GO:0006355 | |
Arst1g04093 | 316 | MobiDBLite | consensus disorder prediction | 103 | 155 | - | - | |
Arst1g04093 | 316 | Pfam | Dof domain, zinc finger | 40 | 96 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst1g04093 | Arst-Chr1 | 102900810 | 102902390 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst1g04093 | 18 | 316 | C2C2-Dof Transcription Factor Family | AT5G60850 | 41.118 | 1.42e-55 | 181 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Arst1g04093 | zf-Dof | 3e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst1g04093 | - | - | adu:107468949 | 534.258 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst1g04093 | 1 | 102900810 | 102902390 | Arst10g02783 | 10 | 93838315 | 93839520 | PCT |