Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04089 ATGATGGAGCTTCCTCAAGCGCGGTCATTTGGAACCGAAGGAAGAAAACCTACGCATGACTTTCTGTCACTCTACAGTAATTCAACTTCCCAACAAGATCCACGACCACCTTCTCAAGGAAGCTACCTCAAGACCCATGATTTCTTGCGAGTAGAAACGAAAGCCAATACAAAGGAAGAAGCCTCGGACGAGACATCATCGACGGTTCAAAAGCTACCACCTGCAGCACCACAACCTCCTCCTTCTGTTGAGAACCACCAGCACCTCTTACCGGGAGGGATTGGAACTTACAGTATTAGCCACATTTCTTATTTTAATAATAACAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATCAAAGGGTTCCAAAGCCAGAGGCACCCCTTTTCACTGTGCGTCAAGCAACTAGCACGGATAGAAACGATGAAAACTCCAACTGCAGTTCTTATACCTCAAGTGGTTTCACTTTATGGGATGAGTCTGCAGTTAAAAAGGGAAAGACAGGGAAGGAGAATAATATTGTGGGCGACAAGCTCATTCCCGGAGAGACACAGTCTGCGAAGCAAGGGCATTGGACGTCCACGGAGGGAACGCCACAGTCATTTTCTAACAATCGTCACAACAGCTTCAACTCTCGCTCTTCATCTCAGACAACGGGACAGAGGAATCAGAGTTTCATAGAAATGATGAAGTCAGCAAAAGATTGTGCCCAAGATGAAGAGCTAGACAATGAAGAAACATACTTTCTTAAGAAAGAGTCCTCGAATCCTGAAAGAGAACTCAGGGTGAAAGTTGATGGAAAGAGTACTGATCAAAAGCCAAACACACCAAGGTCAAAACATTCAGCAACAGAACAGCGGAGGAGGAGCAAAATTAATGACAGATTCCAGATGCTACGAGAGTTAATTCCACACAGTGACCAAAAGAGAGACAAAGCATCTTTTTTGCTCGAGGTCATTGAGTATATTCATTTCTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTCCAAGGATGGAACCACGAGCCAGAAAAACTGATGCCATGGAGGAATAATGACAAGCCAGCAGAGAGTTTTGAAGCTTGTGGCACAAATAGCGGGTCAGGTCCATCGCCAACCTTGCTCTTTGCTTCAAAGATTGATGAGAAAAATATCACTCTCTCCCCACCAATTACTGGTAGTTCTCAGAAACTAGAACCTGGCTTGAACACAGCAACTCCCTTCAAGAACATGGATCATCCTCCTGGAATAACAAACACCACTTTCCCAATTCCTATTTCTTCACCGCCAAACTTCTTCCCTCCTAGAAAAAGCATTGGTCTAGGCGAAATGCCTCACGTCACACATAGACTTCCATCTGATGCAGGGAATGGCATATACCAACCTTCAGTGGAGTGTCAGACTGTGACTGCTACTAATGAAAAGTTGAAAGAGAAAGAGCTAGCTATTGAAGGTGGTGCCATTAGCATATCAAGTGTATACTCAAAAGGGTTGTTGGATACACTTACACATGCACTCCAGAGTTCGGGAGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAGCTTCGTAAGCAAGAAAACATTATCAGACCAACTCTGCCAATGTCAATGTGTGGCATTAAGGGCGATGAAGTTCCTTCTAACAATCAAAGGATGATGCGCTCTAGAGTTGCTACCTCTGGGAAATCTGACCAACCAGTAAAGAAGCTAAAGTCTTGCAAAACCTAA 1764 0.4331 MMELPQARSFGTEGRKPTHDFLSLYSNSTSQQDPRPPSQGSYLKTHDFLRVETKANTKEEASDETSSTVQKLPPAAPQPPPSVENHQHLLPGGIGTYSISHISYFNNNNNNNNNNNNNNNNNNNNNNNQRVPKPEAPLFTVRQATSTDRNDENSNCSSYTSSGFTLWDESAVKKGKTGKENNIVGDKLIPGETQSAKQGHWTSTEGTPQSFSNNRHNSFNSRSSSQTTGQRNQSFIEMMKSAKDCAQDEELDNEETYFLKKESSNPERELRVKVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNHEPEKLMPWRNNDKPAESFEACGTNSGSGPSPTLLFASKIDEKNITLSPPITGSSQKLEPGLNTATPFKNMDHPPGITNTTFPIPISSPPNFFPPRKSIGLGEMPHVTHRLPSDAGNGIYQPSVECQTVTATNEKLKEKELAIEGGAISISSVYSKGLLDTLTHALQSSGVDLSQASISVQIELRKQENIIRPTLPMSMCGIKGDEVPSNNQRMMRSRVATSGKSDQPVKKLKSCKT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04089 587 MobiDBLite consensus disorder prediction 175 231 - -
Arst1g04089 587 MobiDBLite consensus disorder prediction 257 300 - -
Arst1g04089 587 CDD bHLH_AtBIM_like 284 360 - -
Arst1g04089 587 MobiDBLite consensus disorder prediction 21 39 - -
Arst1g04089 587 MobiDBLite consensus disorder prediction 105 133 - -
Arst1g04089 587 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 283 357 IPR036638 GO:0046983
Arst1g04089 587 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 584 IPR044295 GO:0003700|GO:0006351|GO:0046983
Arst1g04089 587 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 285 335 IPR011598 GO:0046983
Arst1g04089 587 FunFam BHLH domain class transcription factor 283 355 - -
Arst1g04089 587 MobiDBLite consensus disorder prediction 195 231 - -
Arst1g04089 587 MobiDBLite consensus disorder prediction 47 65 - -
Arst1g04089 587 Gene3D - 283 356 IPR036638 GO:0046983
Arst1g04089 587 SMART finulus 291 341 IPR011598 GO:0046983
Arst1g04089 587 MobiDBLite consensus disorder prediction 1 92 - -
Arst1g04089 587 MobiDBLite consensus disorder prediction 555 587 - -
Arst1g04089 587 Pfam Helix-loop-helix DNA-binding domain 287 336 IPR011598 GO:0046983
Arst1g04089 587 MobiDBLite consensus disorder prediction 560 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04089 Arst-Chr1 102771425 102778503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04089 2 537 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 45.863 2.94e-114 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g04089 HLH 5.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04089 - - adu:107468970 1096.26