Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04087 ATGATGGAGCTTCCTCAAGCGCGGTCATTTGGAACCGAAGGAAGAAAACCTACGCATGACTTTCTGTCACTCTACAGTAATTCAACTTCCCAACAAGATCCACGACCACCTTCTCAAGGAAGCTACCTCAAGACCCATGATTTCTTGCGAGTAGAAACGAAAGCCAATACAAAGGAAGAAGCCTCGGACGAGACATCATCGACGGTTCAAAAGCTACCACCTGCAGCACCACAACCTCCTCCTTCTGTTGAGAACCACCAGCACCTCTTACCGGGAGGGATTGGAACTTACAGTATTAGCCACATTTCTTATTTTAATAATAACAACAACAACAACAACAACAACAACAACAACAACAATAATAATAATAATAATAATAATAATCAAAGGGTTCCAAAGCCAGAGGCACCCCTTTTCACTGTGCGTCAAGCAACTAGCACGGATAGAAACGATGAAAACTCCAACTGCAGTTCTTATACCTCAAGTGGTTTCACTTTATGGGATGAGTCTGCAGTTAAAAAGGGAAAGACAGGGAAGGAGAATAATATTGTGGGCGACAAGCTCATTCCCGGAGAGACACAGTCTGCGAAGCAAGGGCATTGGACGTCCACGGAGGGAACGCCACAGTCATTTTCTAACAATCGTCACAACAGCTTCAACTCTCGCTCTTCATCTCAGACAACGGGACAGAGGAATCAGAGTTTCATAGAAATGATGAAGTCAGCAAAAGATTGTGCCCAAGATGAAGAGCTAGACAATGAAGAAACATACTTTCTTAAGAAAGAGTCCTCGAATCCTGAAAGAGCAGAACTCAGGGTGAAAGTTGATGGAAAGAGTACTGATCAAAAGCCAAACACACCAAGGTCAAAACATTCAGCAACAGAACAGCGGAGGAGGAGCAAAATTAATGACAGATTCCAGATGCTACGAGAGTTAATTCCACACAGTGACCAAAAGAGAGACAAAGCATCTTTTTTGCTCGAGGTCATTGAGTATATTCATTTCTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTCCAAGGATGGAACCACGAGCCAGAAAAACTGATGCCATGGAGGAATAATGACAAGCCAGCAGAGAGTTTTGAAGCTTGTGGCACAAATAGCGGGTCAGGTCCATCGCCAACCTTGCTCTTTGCTTCAAAGATTGATGAGAAAAATATCACTCTCTCCCCACCAATTACTGGTAGTTCTCAGAAACTAGAACCTGGCTTGAACACAGCAACTCCCTTCAAGAACATGGATCATCCTCCTGGAATAACAAACACCACTTTCCCAATTCCTATTTCTTCACCGCCAAACTTCTTCCCTCCTAGAAAAAGCATTGGTCTAGGCGAAATGCCTCACGTCACACATAGACTTCCATCTGATGCAGGGAATGGCATATACCAACCTTCAGTGGAGTGTCAGACTGTGACTGCTACTAATGAAAAGTTGAAAGAGAAAGAGCTAGCTATTGAAGGTGGTGCCATTAGCATATCAAGTGTATACTCAAAAGGGTTGTTGGATACACTTACACATGCACTCCAGAGTTCGGGAGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAGCTTCGTAAGCAAGAAAACATTATCAGACCAACTCTGCCAATGTCAATGTGTGGCATTAAGGGCGATGAAGTTCCTTCTAACAATCAAAGGATGATGCGCTCTAGAGTTGCTACCTCTGGGAAATCTGACCAACCAGTAAAGAAGCTAAAGTCTTGCAAAACCTAA 1767 0.4335 MMELPQARSFGTEGRKPTHDFLSLYSNSTSQQDPRPPSQGSYLKTHDFLRVETKANTKEEASDETSSTVQKLPPAAPQPPPSVENHQHLLPGGIGTYSISHISYFNNNNNNNNNNNNNNNNNNNNNNNQRVPKPEAPLFTVRQATSTDRNDENSNCSSYTSSGFTLWDESAVKKGKTGKENNIVGDKLIPGETQSAKQGHWTSTEGTPQSFSNNRHNSFNSRSSSQTTGQRNQSFIEMMKSAKDCAQDEELDNEETYFLKKESSNPERAELRVKVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNHEPEKLMPWRNNDKPAESFEACGTNSGSGPSPTLLFASKIDEKNITLSPPITGSSQKLEPGLNTATPFKNMDHPPGITNTTFPIPISSPPNFFPPRKSIGLGEMPHVTHRLPSDAGNGIYQPSVECQTVTATNEKLKEKELAIEGGAISISSVYSKGLLDTLTHALQSSGVDLSQASISVQIELRKQENIIRPTLPMSMCGIKGDEVPSNNQRMMRSRVATSGKSDQPVKKLKSCKT 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04087 588 MobiDBLite consensus disorder prediction 175 231 - -
Arst1g04087 588 Pfam Helix-loop-helix DNA-binding domain 288 337 IPR011598 GO:0046983
Arst1g04087 588 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 585 IPR044295 GO:0003700|GO:0006351|GO:0046983
Arst1g04087 588 SMART finulus 292 342 IPR011598 GO:0046983
Arst1g04087 588 MobiDBLite consensus disorder prediction 21 39 - -
Arst1g04087 588 FunFam BHLH domain class transcription factor 284 356 - -
Arst1g04087 588 MobiDBLite consensus disorder prediction 105 133 - -
Arst1g04087 588 CDD bHLH_AtBIM_like 285 361 - -
Arst1g04087 588 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 286 336 IPR011598 GO:0046983
Arst1g04087 588 MobiDBLite consensus disorder prediction 556 588 - -
Arst1g04087 588 Gene3D - 284 357 IPR036638 GO:0046983
Arst1g04087 588 MobiDBLite consensus disorder prediction 257 301 - -
Arst1g04087 588 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 284 358 IPR036638 GO:0046983
Arst1g04087 588 MobiDBLite consensus disorder prediction 561 579 - -
Arst1g04087 588 MobiDBLite consensus disorder prediction 195 231 - -
Arst1g04087 588 MobiDBLite consensus disorder prediction 47 65 - -
Arst1g04087 588 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04087 Arst-Chr1 102771425 102778503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04087 2 538 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 46.043 2.25e-115 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g04087 HLH 5.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04087 - - adu:107468970 1102.43