Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04079 ATGGCAGATGTAACGTACCTTCTCCACCATCACCACCCTGAACACGACGACGACCCTCACCAAACGCTAACCCTACCACCCTACTGGTCTCCTCACGATTTCGATTTCTACGCCTCCGATCCCGAATTCCCCCAACAACCGCATAACAACCACCACCACCACCACCACCACCATCGCCACCACCACTTTCCCCAATCTGGTTCGTCCTCCATTCTCGACCGAGAGAATCAGGTCAATTTCGTTATGGATTTATTCCAGCAGCGTGTTGAGCAGTCACAGGTCATGGGACACCCTTTAAACGACGCCGTTTTCGGGAGCAGCGATTTTGGGATTGAAATGGACGCTTTTACCCTTGATTTAGGGTTCCCTTCTGACAGGGACTCCCACCACCGCGCCAATGCCGCTGGAGGGGATTCTTCCGCCGGTGGTGTCGTTGTCGTCGACGATGACGATTTCTTCTTCGGGAGGAGGGTTTCGGGGTCCGAATCCGGCGACGCGGCGGCGTTCGAGAACTGCGTGAGCCTCCTAGGGTTCGGATCGGACTCCGACGAGGAAGAAGACAACGGCGTTCTCCGAATCTGCGTGCATTCCGACGAAGAGTACACTTTGCACGACGAAAACGACGACGTTTCGAGTATTCCTCTGTGCTGGGACTCGCTGCAGTTGGAAGATAACAGAGAGAACAACGACGATTTCGAGTGGGAGGAGGTTGATGGAAGGGTCGACGAGAGGGAAGTTCTAAGCATGCTCACCGTCGAAGACGATAGATCCGGCTCGGTGTCCGTTTCGCCGATCACCGGAATCGAAGAAGCCGAAGAAGAAGAGGTTAACGTTTTTAGGGTTGGAGGAATGGAGAATTTGGAATGGGAAGTGCTTCTGAATGCAAACAATTTGGACACAATCACGAGCCCGGATTTGGATCACGATTCCGAACCCTATTTTGGTGATCACGATGATTATATTTACACTGCAGAGTATGAAATGATGTTTGGCCAATTCGCCGATAATGATAATCCATTGAACGGTAGGCCTCCGGCTTCGGCTTCCGTCGTCCGGAGCCTGCCGTCAGTGGTGGTAACAAAGGATGACGTGGAAGGGAACAATGCGCTCTGTGCTGTTTGCAAGGATGAGTTTTGTGTTGGGGAGAGTGTAAAGGTGTTGCCTTGTTCCCATCGTTATCATGGTGACTGCATTCTGCCATGGTTGGGGATTAGGAACACTTGCCCCGTCTGCCGCCATGAGTTCCCCACTGATGATGCTGATTATGAACGTAGGAGGCTGCACAGATCTGGCCAGAGGATTTGA 1305 0.5249 MADVTYLLHHHHPEHDDDPHQTLTLPPYWSPHDFDFYASDPEFPQQPHNNHHHHHHHHRHHHFPQSGSSSILDRENQVNFVMDLFQQRVEQSQVMGHPLNDAVFGSSDFGIEMDAFTLDLGFPSDRDSHHRANAAGGDSSAGGVVVVDDDDFFFGRRVSGSESGDAAAFENCVSLLGFGSDSDEEEDNGVLRICVHSDEEYTLHDENDDVSSIPLCWDSLQLEDNRENNDDFEWEEVDGRVDEREVLSMLTVEDDRSGSVSVSPITGIEEAEEEEVNVFRVGGMENLEWEVLLNANNLDTITSPDLDHDSEPYFGDHDDYIYTAEYEMMFGQFADNDNPLNGRPPASASVVRSLPSVVVTKDDVEGNNALCAVCKDEFCVGESVKVLPCSHRYHGDCILPWLGIRNTCPVCRHEFPTDDADYERRRLHRSGQRI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04079 434 MobiDBLite consensus disorder prediction 39 70 - -
Arst1g04079 434 MobiDBLite consensus disorder prediction 49 64 - -
Arst1g04079 434 Pfam Ring finger domain 371 412 IPR001841 -
Arst1g04079 434 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 238 413 - -
Arst1g04079 434 ProSiteProfiles Zinc finger RING-type profile. 371 412 IPR001841 -
Arst1g04079 434 SUPERFAMILY RING/U-box 354 418 - -
Arst1g04079 434 SMART ring_2 371 411 IPR001841 -
Arst1g04079 434 FunFam E3 ubiquitin-protein ligase RING1-like 332 418 - -
Arst1g04079 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 418 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04079 Arst-Chr1 102675674 102677395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04079 8 418 C3H Transcription Factor Family AT5G60820 36.830 1.77e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04079 - - pcin:129307991 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04079 1 102675674 102677395 Arst1g04079 1 102675674 102677395 ECH