Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04078 ATGGAAGGCGATGATGCCGAGCAAGTCCATTCTGGAATACCTTATGTTACCTTACCACACTATCTGCACTATCCTTCCCAAAACCAGAAACCTATGTTGACCTCAAGCTTCTCAAACATGGAATTTGGAGAAGACCACCATGCTTTGAAACATTTGGATCCTTCTCATGGTTTAGATCATCTTCCTTTGTGCTACTCCCAACTTCAGCTTCCTGTTAATAATAGCAACAATCCAATTCATATCCCTGTTCATAAGTCCTCCCCAACAAACACACCATCCAACAGAAACAACAATTCCGACGAAGCAAAGGCTGTCCTTGATGACCGAAAGAAAAAGAGGATGTTCTCCAACAGGGAGTTGGCTCGCAGGTCACGGATGCGAAAGAAGCAACAGATCGAAGTCCTTCAGTACCATGTTGAGCATCTTCAGACTTTGAACCATCAGCTGTCCCAAAAAATCATTTACTTCTTGGAATGTAACCAACAGAATGCTCAACTTAAAGAGAAGGTTTCTTCTCTTAAAGTAGCCCTCTCTGACTTGTTAGTTCCTGTTGGACATGCTACTGACCAACCTCAACACATCCCTGGCGGCTTCCTCTCCAAGCCTTCGACTCAAACAATTGCTAGCTCTGGAGCATAA 639 0.4382 MEGDDAEQVHSGIPYVTLPHYLHYPSQNQKPMLTSSFSNMEFGEDHHALKHLDPSHGLDHLPLCYSQLQLPVNNSNNPIHIPVHKSSPTNTPSNRNNNSDEAKAVLDDRKKKRMFSNRELARRSRMRKKQQIEVLQYHVEHLQTLNHQLSQKIIYFLECNQQNAQLKEKVSSLKVALSDLLVPVGHATDQPQHIPGGFLSKPSTQTIASSGA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04078 212 MobiDBLite consensus disorder prediction 76 100 - -
Arst1g04078 212 Gene3D - 108 179 - -
Arst1g04078 212 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 28 186 IPR044521 -
Arst1g04078 212 SMART brlzneu 105 172 IPR004827 GO:0003700|GO:0006355
Arst1g04078 212 MobiDBLite consensus disorder prediction 76 104 - -
Arst1g04078 212 CDD bZIP_plant_GBF1 110 153 IPR045314 GO:0003700|GO:0006355
Arst1g04078 212 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 173 IPR004827 GO:0003700|GO:0006355
Arst1g04078 212 FunFam BZIP transcription factor 107 158 - -
Arst1g04078 212 MobiDBLite consensus disorder prediction 193 212 - -
Arst1g04078 212 Pfam Basic region leucine zipper 107 153 IPR004827 GO:0003700|GO:0006355
Arst1g04078 212 SUPERFAMILY Leucine zipper domain 109 158 IPR046347 GO:0003700|GO:0006355
Arst1g04078 212 MobiDBLite consensus disorder prediction 197 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04078 Arst-Chr1 102673105 102673743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04078 107 210 bZIP Transcription Factor Family AT5G60830 46.903 3.57e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst1g04078 bZIP_2 3.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04078 - - ahf:112721804 399.438