Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04072 ATGGGGTGTTCATTTTCTGGTTTGAACGCACTTTACGATTCCGTTAACGGAGGCGGAGATGTTTGGATCAACGAGAACCGGTTCCGTATCGTCAGGCAGCTCGGTGAAGGTGGAAACGCCTATGTCTTCCTCGTCAAGGACGTTCCCGCCGACAACGTCTCCGGCGGTTTCTCCTCCAAGCTCAAACAGTCCTCTCACATTTCCGAGGACGGAACATATGCTATGAAAAAGGTCCTCATCAAGAGCAAAGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCGTGTTTCCTCACTGTTCAACCACCCAAATCTGCTCCCGCTTCTCGATCATGCAATCATTTCTGTCAAGCCTACTCCACAAAAATCTTGGAACCACGAGGCATACTTGTTATTTCCACTTCATTTGGATGGAACACTGCTAGATAATACCAAGACAATGCAAGCCAGGAAGGAATCCTTTCCTACCTCGGATGTTCTTCAAATCTTTCGACAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATACTCCATATGCTCATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAATCGCCTCTTGCCATACTCATGGATTTTGGCAGTGCTCGTCCTGCCAGGAAGCACATTGGTTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCAGCTGAACACTGTTCTGCCCCTTTCCAAGCTCCGGAGCTGTGGGAATGCCCAAGCCAAGGTGATATAGATGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCAATAATGTGA 807 0.4783 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGNAYVFLVKDVPADNVSGGFSSKLKQSSHISEDGTYAMKKVLIKSKEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTPQKSWNHEAYLLFPLHLDGTLLDNTKTMQARKESFPTSDVLQIFRQLCAGLKHMHGLDTPYAHNDVKPGNVLITHRKGQSPLAILMDFGSARPARKHIGSRSEALQLQEWAAEHCSAPFQAPELWECPSQGDIDERTDVWSLGCTLYAIM 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04072 268 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 268 - -
Arst1g04072 268 Gene3D Transferase(Phosphotransferase) domain 1 135 268 - -
Arst1g04072 268 Pfam Protein kinase domain 56 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04072 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Arst1g04072 268 Gene3D Phosphorylase Kinase; domain 1 13 132 - -
Arst1g04072 268 ProSiteProfiles Protein kinase domain profile. 28 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g04072 268 SUPERFAMILY Protein kinase-like (PK-like) 21 267 IPR011009 -
Arst1g04072 268 SMART serkin_6 28 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04072 Arst-Chr1 102615202 102618576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04072 72 268 EF-hand Containing Proteins AT4G04710 24.378 3.49e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Arst1g04072 Pkinase 8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04072 K08856 - gmx:100803659 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04072 1 102615202 102618576 Arst1g04072 1 102615202 102618576 ECH