Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04044 ATGGAGCCTATGGACATCGTCGGCAAATCGAAGGAAGACGCTTCGCTTCCTAAAGCAACAATGACAAAAATTATTAAAGAGATGTTACCTCCAGATGTACGTGTTGCAAGAGACGCACAAGATCTATTGATCGAGTGTTGTGTAGAATTTATAAACCTTGTTTCGTCGGAGTCCAATGAAGTCTGTAGCAGAGAGGAAAAACGGACTATTGCACCTGAGCATGTACTGAAGGCTTTAGAGGTCCTCGGCTTTGGCGAGTACATTGAAGAAGTCTATGCAGCATATGAACAGCACAAGCTGGAGACCATGGACTCTTTAAAAGGTGGTGGTAAGTGGAGCAATGGAGCTGAGATGACCGAAGAAGAAGCATTAGCAGAGCAGCAACGGATGTTTGCAGAGGCGCGAGCCAGGATGAATGGCGGGGCTATTGCTTCCAAGCAACCAGAAGCTGACCAAAGTTTAGATAGCTAA 471 0.4586 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPEADQSLDS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04044 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Arst1g04044 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Arst1g04044 156 Gene3D Histone, subunit A 4 143 IPR009072 GO:0046982
Arst1g04044 156 FunFam Negative cofactor 2 beta 6 143 - -
Arst1g04044 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04044 Arst-Chr1 102186349 102189430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04044 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 82.468 1.05e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Arst1g04044 CBFD_NFYB_HMF 5.4e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04044 K21751 - gmx:100807912 297.745