Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04022 ATGACGTGGCGGAGGCTGTTAGAGCCTGTGGCTGCACACGCCTCCCTTCTCTGCTTCACTTCTTTGCTTCTTCTAAAGCTTCACCACCGCCTCTCCTTATCGTGGTGGATAATATTCTTTCCTCTTTGGATCTTTCATGCCATTGTGGCTCGAGGGAGGTTTTCATTGCCAGGGTTGTCAGCCCGACATAATCAAAATTGGGCAACAGGTCATGCTGTCGTTGCAATGCCATTACTTACTGCATTTGAACTGCTCCTTTGTATATATCTTGAGAGCATATGTGTTCGTGGTGCTCAAGTAGTCAATATGAAGATTGTGTTCCTTCCATTACTAATATTTGAAATCATTATTGTCATGGAAAATTTCAGATTATGTAGGGCTCTAATGCCAGGGGATGAAGAAAACATGAATGCTGAGCACTTTTCGGTTGCAATCTCTAGGGTCTTCTTCATTACTGCTACAATTTTCACACTCTTAAAACTGAGTGGTGATTTACTCGTTCTCAGCTGGTGGGATTTATTTGTTAACCTTGCCATCGTCGAGTGCTTTGCTTTTCTTGTATGTACAAAGTGGTCCAATCTGGTCAGTGGTTTAGTGGTTTCTTCAGAGGGAAATCGACGCCTAAAGAGAATGTGTAACATGCAAGACATAATCATGGAAGTACCAGTTATAGTATTCCAGATTCTAATTTGTAGGTATTTAGAGGGGGCACCTGCTTGTGCTGAAAAGAAACCTGCACCGAGTTTCTTTTCTTTTCTTTTCCAGCTGCAAAGTGCTGGTGTAATGTTTGCAGCATCTGCCTTAGTGGAGAAACTTATACTGCTATTAAATAGTGGAGCTGCTCCAAGAATATATTCTAGAGGTGTTTCAAGAGTTCATGATTGTTACTTGGGCCTCTTGCACCATGGTTCTAGATTTTTAGGTTGGTTTTCAATTGCTGAAAGGAGCCAGGAAGAACAGGAAAATTTGGACTGTGAAGGATCTTCTGGTTATAATACGTTCTCTGGCAACCCACCTGTACCTGAGATCATTAAGAAAATGCCTAAAAAGGATCTTGCTGAGGAGGTTTGGAGACTGCAGACAGCTCTTGGTGAGCAGGCAGAAATTACAAAATGCCGCGAGCGGGAGTATGAAAGGCTTAAAAATGAGAAAATATTATGCAGAATTTGTTTTCAGAGAGAGATTAGCATTGTACTACTTCCATGCAGGCATCGCAGTCTTTGCAGCACATGCGCGGCGAAATGCAAGAACTGCCCAATCTGCCGCGACAATATTATAATGCGATTACCCGTATATGATGCTTAG 1305 0.423 MTWRRLLEPVAAHASLLCFTSLLLLKLHHRLSLSWWIIFFPLWIFHAIVARGRFSLPGLSARHNQNWATGHAVVAMPLLTAFELLLCIYLESICVRGAQVVNMKIVFLPLLIFEIIIVMENFRLCRALMPGDEENMNAEHFSVAISRVFFITATIFTLLKLSGDLLVLSWWDLFVNLAIVECFAFLVCTKWSNLVSGLVVSSEGNRRLKRMCNMQDIIMEVPVIVFQILICRYLEGAPACAEKKPAPSFFSFLFQLQSAGVMFAASALVEKLILLLNSGAAPRIYSRGVSRVHDCYLGLLHHGSRFLGWFSIAERSQEEQENLDCEGSSGYNTFSGNPPVPEIIKKMPKKDLAEEVWRLQTALGEQAEITKCREREYERLKNEKILCRICFQREISIVLLPCRHRSLCSTCAAKCKNCPICRDNIIMRLPVYDA 434
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04022 434 Pfam Transmembrane Fragile-X-F protein 25 254 IPR019396 -
Arst1g04022 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 432 IPR013083 -
Arst1g04022 434 SUPERFAMILY RING/U-box 379 428 - -
Arst1g04022 434 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 194 - -
Arst1g04022 434 SMART ring_2 387 421 IPR001841 -
Arst1g04022 434 ProSiteProfiles Zinc finger RING-type profile. 387 422 IPR001841 -
Arst1g04022 434 Pfam Zinc finger, C3HC4 type (RING finger) 385 425 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst1g04022 Arst-Chr1 101887588 101894303 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04022 3 433 C3H Transcription Factor Family AT1G73950 58.691 9.52e-180 507
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04022 - - ahf:112738273 807.749