Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04021 ATGACGTGGCGGAGGCTGTTAGAGCCTGTGGCTGCACACGCCTCCCTTCTCTGCTTCACTTCTTTGCTTCTTCTAAAGCTTCACCACCGCCTCTCCTTATCGTGGTGGATAATATTCTTTCCTCTTTGGATCTTTCATGCCATTGTGGCTCGAGGGAGGTTTTCATTGCCAGGGTTGTCAGCCCGACATAATCAAAATTGGGCAACAGGTCATGCTGTCGTTGCAATGCCATTACTTACTGCATTTGAACTGCTCCTTTGTATATATCTTGAGAGCATATGTGTTCGTGGTGCTCAAGTAGTCAATATGAAGATTGTGTTCCTTCCATTACTAATATTTGAAATCATTATTGTCATGGAAAATTTCAGATTATGTAGGGCTCTAATGCCAGGGGATGAAGAAAACATGAATGCTGAGGTAATATGGGAAACTCCTCCTCACTTTTCGGTTGCAATCTCTAGGGTCTTCTTCATTACTGCTACAATTTTCACACTCTTAAAACTGAGTGGTGATTTACTCGTTCTCAGCTGGTGGGATTTATTTGTTAACCTTGCCATCGTCGAGTGCTTTGCTTTTCTTGTATGTACAAAGTGGTCCAATCTGGTCAGTGGTTTAGTGGTTTCTTCAGAGGGAAATCGACGCCTAAAGAGAATGTGTAACATGCAAGACATAATCATGGAAGTACCAGTTATAGTATTCCAGATTCTAATTTGTAGGTATTTAGAGGGGGCACCTGCTTGTGCTGAAAAGAAACCTGCACCGAGTTTCTTTTCTTTTCTTTTCCAGCTGCAAAGTGCTGGTGTAATGTTTGCAGCATCTGCCTTAGTGGAGAAACTTATACTGCTATTAAATAGTGGAGCTGCTCCAAGAATATATTCTAGAGGTGTTTCAAGAGTTCATGATTGTTACTTGGGCCTCTTGCACCATGGTTCTAGATTTTTAGGTTGGTTTTCAATTGCTGAAAGGAGCCAGGAAGAACAGGAAAATTTGGACTGTGAAGGATCTTCTGGTTATAATACGTTCTCTGGCAACCCACCTGTACCTGAGATCATTAAGAAAATGCCTAAAAAGGATCTTGCTGAGGAGGTTTGGAGACTGCAGACAGCTCTTGGTGAGCAGGCAGAAATTACAAAATGCCGCGAGCGGGAGTATGAAAGGCTTAAAAATGAGAAAATATTATGCAGAATTTGTTTTCAGAGAGAGATTAGCATTGTACTACTTCCATGCAGGCATCGCAGTCTTTGCAGCACATGCGCGGCGAAATGCAAGAACTGCCCAATCTGCCGCGACAATATTATAATGCGATTACCCGTATATGATGCTTAG 1326 0.4231 MTWRRLLEPVAAHASLLCFTSLLLLKLHHRLSLSWWIIFFPLWIFHAIVARGRFSLPGLSARHNQNWATGHAVVAMPLLTAFELLLCIYLESICVRGAQVVNMKIVFLPLLIFEIIIVMENFRLCRALMPGDEENMNAEVIWETPPHFSVAISRVFFITATIFTLLKLSGDLLVLSWWDLFVNLAIVECFAFLVCTKWSNLVSGLVVSSEGNRRLKRMCNMQDIIMEVPVIVFQILICRYLEGAPACAEKKPAPSFFSFLFQLQSAGVMFAASALVEKLILLLNSGAAPRIYSRGVSRVHDCYLGLLHHGSRFLGWFSIAERSQEEQENLDCEGSSGYNTFSGNPPVPEIIKKMPKKDLAEEVWRLQTALGEQAEITKCREREYERLKNEKILCRICFQREISIVLLPCRHRSLCSTCAAKCKNCPICRDNIIMRLPVYDA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04021 441 ProSiteProfiles Zinc finger RING-type profile. 394 429 IPR001841 -
Arst1g04021 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 370 439 IPR013083 -
Arst1g04021 441 SUPERFAMILY RING/U-box 386 435 - -
Arst1g04021 441 SMART ring_2 394 428 IPR001841 -
Arst1g04021 441 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 201 - -
Arst1g04021 441 Pfam Transmembrane Fragile-X-F protein 25 261 IPR019396 -
Arst1g04021 441 Pfam Zinc finger, C3HC4 type (RING finger) 392 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04021 Arst-Chr1 101887588 101894305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04021 3 440 C3H Transcription Factor Family AT1G73950 59.368 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04021 - - ahf:112738273 831.247