Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03992 ATGAATATGCTCAGAGAAAGAAGACACAGTTCAGTGAGAATGGCTACACTACTAAGCTCAAATTGTTATAGTGATAATCATGGGGTCCTACTTCTCCTTCTTTTGTTACTACTACAGATCTCATCTCAACTTGCAAACTGTGGCAGCATAGTGAAGTTCCTTCCAGGGTTCCAGGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATATAGGAGTGGGTGAAAATGAAGATGTGCAGGCTTTCTACTATTTCATCGAGTCAGAGAACAATCCTAAGGTGGATCCTCTCATGTTGTGGCTCACCGGTGGTCCTGGATGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATCGGACCACTTGGATTTCAAAATGAGGAATATAATGGGAGCTTGCCAAATTTGGTCTATAGGCCATACTCATGGACAAAGACAAGTAGCATTATATTTGTAGATTTACCTGTTAATACAGGCTTCACATATGCCAGATCAGAATCTGCCACAGCGCGAAGCGACTCATTGCTAGTCAACCAAACTCATCAATTTCTTAGGAAGTGGCTAACTGAGCATCCACAATTTTTCTCAAATGAATTTTTCGTCGGAGGCGATTCATACTCCGGTATTCCTATTCCAGTAATTGTTGATGAAATTTCACGAGAAAATGAAGAAGGAGTCCAACCTTGGATAAATCTTCAGGGGTACCTTCTGGGGAATGCTGCAACAACCCGAGTTGAGAAAAACTATCAAATCCCATTTGCTCATGGAATGGGACTAATTTCTGATGAACTATACCAGTCACTGCAAACAAATTGTAGAGGAGAATATATAAAAGTAGACACTAGAAGTGCATTATGTTCAAGAGATCTCAAGTCCTTTGATGAGATGACATCAGGACTCAATAAAGCCCATATTTTGGAACCTTCATGTGAATTTGGTTCACCTAAACCATTGAAGACTTCTTGGAGACGATCTATAACCGAAAACTATCCTTTGAAGTTCGTCAGCAACACTCGTCTCAGATTACCACCCTTGAACTGCCGGACTTATGGATACTTCCTTAGTAGTTATTGGGCCAATGATGACAAAGTACGGAATGCGCTAAACATACGAAAGGGAACAAAAAAGGAATGGCAACGCTGCACCTACAATATACCCAACAAGGAGGATATCCCTAGCAGCTTTCCATATCATGTAAAGCTCAGCAGAAAAGGCTATCGTTCGCTGATATACAGCGGCGATCATGACATGAATGTTCCTTTCATGGCGACTCAAGTGTGGATAAGATCGCTAAACTACTCAATAGTTGATGATTGGAGGCCATGGTATACAAATGGCCAAGTTGCAGGATATACAAGAACTTACTCCAATATGATGACATTTGCAACTGTTAAGAATGGAGGGCACACAGCTCCTGAATACAAGCCTGAAGAATGCTTGGACATGTATAGTAGGTGGATCTCTAACAGGCCATTGTAG 1470 0.4156 MNMLRERRHSSVRMATLLSSNCYSDNHGVLLLLLLLLLQISSQLANCGSIVKFLPGFQGPLPFVLETGYIGVGENEDVQAFYYFIESENNPKVDPLMLWLTGGPGCSAFSGLVFEIGPLGFQNEEYNGSLPNLVYRPYSWTKTSSIIFVDLPVNTGFTYARSESATARSDSLLVNQTHQFLRKWLTEHPQFFSNEFFVGGDSYSGIPIPVIVDEISRENEEGVQPWINLQGYLLGNAATTRVEKNYQIPFAHGMGLISDELYQSLQTNCRGEYIKVDTRSALCSRDLKSFDEMTSGLNKAHILEPSCEFGSPKPLKTSWRRSITENYPLKFVSNTRLRLPPLNCRTYGYFLSSYWANDDKVRNALNIRKGTKKEWQRCTYNIPNKEDIPSSFPYHVKLSRKGYRSLIYSGDHDMNVPFMATQVWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNMMTFATVKNGGHTAPEYKPEECLDMYSRWISNRPL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03992 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Arst1g03992 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Arst1g03992 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Arst1g03992 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Arst1g03992 489 FunFam Carboxypeptidase 343 488 - -
Arst1g03992 489 FunFam Carboxypeptidase 391 486 - -
Arst1g03992 489 Gene3D alpha/beta hydrolase 47 313 IPR029058 -
Arst1g03992 489 FunFam Serine carboxypeptidase-like 11 45 489 - -
Arst1g03992 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 473 IPR001563 GO:0004185|GO:0006508
Arst1g03992 489 Gene3D - 346 489 - -
Arst1g03992 489 Pfam Serine carboxypeptidase 55 486 IPR001563 GO:0004185|GO:0006508
Arst1g03992 489 SUPERFAMILY alpha/beta-Hydrolases 51 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03992 Arst-Chr1 101525503 101529156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03992 45 74 Calmodulin-binding Proteins AT2G22960 76.667 5.84e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03992 K16296 - gmx:100792006 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03992 1 101525503 101529156 Arst1g03992 1 101525503 101529156 ECH