Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03968 ATGAAGGATCCAAAGGAGGATGAAGAGAAATCTAGGAGGGTTGTGGAGAAATCCACGGAGCTTAGAAGAAGGGGAAGAAGGAGAAACAAGCAATGCAGCAAAGCAGATAGATTACAAGAGAAAGGATTTGATTCACAGCTTGTGTCCTCTACTTGTTCCAAGAATCTTGTGTTCGCTGCAAGGCCTGGCTATGGCCACCTTGGAACAAAATGTGTCGTCAAAGCTAACCACTTCCTTGCAGATATTTCAGCATCTGACCTCAGCCATTACACTGTTAAGATAATACCTGAAGTGAGGTGTCGCAAAACAAGCAAAGCTATAATAGCTGAGTTGGTGAGGGTTCATAAGAACACTGACTTAGGGATGAGGCTTCCTGTTTATGATGGAGGAAGGAATCTTTACACTGCTGCCATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGACTGAAGATGATGAGAGTATTGGTACTACCAGGTAAGTTTATTATTCAAGTTATTATATTTTATAATATAACATTATTTTGATCCTCATGCATCAATTACGTGAGCTTCTCAGTGGGAAACAAGTGGACACACCACAAGAAGCACTTACTGTTATTGACATTGTTCTGAGGGAGCTTGCAGCACAGAGTTACGTGTCCATTGGGAGGTTTCTGTATTCTCCTGATTTTAGAAAACCACAGCAGCTTGGTGGTGGCTTAGAATCATGGCGTGGATTCTACCAAAGTATAAGGCCTACCCAGATGGGTTTATCACTTAATATTGACATGTCATCAATGGCGTTTATTGAGCCACTCCCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAGCCATTGTCGGATGCAGATCGTGTCAAGATTAAGAAGGCCCTAAGAGGTGTAAAAGTTGAAGTTACACATAGAGGGAGTTTTAGAAGGAAGTACAGGATATCAGGATTGACATCACAGCCAACAAGGGAGCTTAACTTCCCTCTTGATGAGAAAATGAACATGAAATCAGTGGTTGATTATTTTCAAGAAATGTATGGATACACAATCAAGTATCCTCATCTACCTTGTCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCAATGGAGGCATGCAAGATAGTTGGAGGCCAGAGGTATACAAAAGGGCTAAACGAAAAGCAGATAACTTCTCTCTTGAAGGTCTCATGCCAGAGACCACGCGAACAAGAGACAGATATTCTTCAGACAATTCAAGAAAATGATTATGAATATAATCCGTATGCGAAAGAGTTTGGTATAAGTGTAGACAGCAAGCTTACATCAGTTGATGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCATGACACTGGAAGAGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTAATAAATGGAAGCACTGTAAGATACTGGGCATGTATCAATTTCTCAAGAAGTGTTCAAGAAAGCACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTTAGCCAGGACCCTGTGATTCCTGTATATTCAGCAAAACCTGATCTAGTTAAGAAGGCTTTGAAGTATGTACATTCAGCTTCTCTAGAAAATCTTGGTGGCAAGGAGCTAGAGTTGCTTATTGCAATTCTTCCAGACAACAATGGCTCTCTATATGGTGATCTCAAAAGAATCTGCGAAACTGATCTTGGGTTGATTTCTCAGTGTTGTCTTACAAAGCATGTATTCAAGATTAATAGACAGTACTTGGCAAATGTTGCACTCAAAATCAATGTCAAGATGGGAGGAAGGAACACAGTGCTTTTGGATGCTTTAAGTTGGAGGATCCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCCGGAGAGGACTCTTGTCCTTCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCAGAAGTAACAAAGTACGCAGGATTGGTTTGCGCGCAGCCTCATCGGGAAGAACTCATACAAGATCTTTTTAAATGCTGGAAAGATCCTCATCATGGTGTAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCAACTGGACAAAAACCACTGAGGATAATATTTTACAGGGACGGGGTAAGCGAAGGACAATTCTACCAAGTTTTGCTATATGAACTTGATGCCATTCGTAAGGCTTGTGCATCTTTGGAACCAAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGTCATCATACTAGACTCTTCTCAAGCAATCATGATGATAGAAATAGCACTGACAAGAGTGGCAATATCTTACCTGGTACTGTGGTTGATTCTAAGATCTGTCATCCTACAGAATTTGACTTCTATTTATGCAGTCATGCTGGAATTCAGGGTACAAGTAGACCAGCTCACTACCATGTCTTATGGGATGAGAACAATTTCACTGCTGATGAAATTCAGTCTCTCACCAACAACTTATGCTACACTTATGCAAGGTGTACAAGATCTGTTTCAGTAGTGCCTCCTGCATACTATGCTCATTTGGCAGCATACCGAGCTCGATTCTACATGGAACCTGGTGCCACTGAGATTTCTAAAGCGCGGGGTGCAAGATCAAAAGATGGTTCAGTTCGGCCACTCCCAGCTCTCAAAGAAAAAGTCAAGAATGTCATGTTCTACTGTTGA 2742 0.4125 MKDPKEDEEKSRRVVEKSTELRRRGRRRNKQCSKADRLQEKGFDSQLVSSTCSKNLVFAARPGYGHLGTKCVVKANHFLADISASDLSHYTVKIIPEVRCRKTSKAIIAELVRVHKNTDLGMRLPVYDGGRNLYTAAMLPFTYKEFTILLTEDDESIGTTRXVYYSSYYILXYNIILILMHQLRELLSGKQVDTPQEALTVIDIVLRELAAQSYVSIGRFLYSPDFRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGSFRRKYRISGLTSQPTRELNFPLDEKMNMKSVVDYFQEMYGYTIKYPHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQTIQENDYEYNPYAKEFGISVDSKLTSVDARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPVYSAKPDLVKKALKYVHSASLENLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPGATEISKARGARSKDGSVRPLPALKEKVKNVMFYC 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03968 913 FunFam protein argonaute 10-like 625 913 - -
Arst1g03968 913 CDD Piwi_ago-like 426 876 IPR045246 -
Arst1g03968 913 Pfam Argonaute linker 2 domain 410 454 IPR032472 -
Arst1g03968 913 MobiDBLite consensus disorder prediction 1 22 - -
Arst1g03968 913 SUPERFAMILY PAZ domain 263 422 IPR036085 GO:0005515
Arst1g03968 913 Gene3D - 625 913 IPR036397 GO:0003676
Arst1g03968 913 Gene3D paz domain 262 386 - -
Arst1g03968 913 SMART DUF1785_2 215 267 IPR014811 -
Arst1g03968 913 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 59 877 - -
Arst1g03968 913 Gene3D - 446 619 - -
Arst1g03968 913 Pfam N-terminal domain of argonaute 69 206 IPR032474 -
Arst1g03968 913 FunFam Argonaute 10 446 619 - -
Arst1g03968 913 CDD PAZ_argonaute_like 267 381 - -
Arst1g03968 913 SMART PAZ_2_a_3 272 404 IPR003100 GO:0005515
Arst1g03968 913 Pfam Argonaute linker 1 domain 216 265 IPR014811 -
Arst1g03968 913 SUPERFAMILY Ribonuclease H-like 546 877 IPR012337 -
Arst1g03968 913 Pfam Mid domain of argonaute 465 542 IPR032473 -
Arst1g03968 913 Pfam PAZ domain 272 398 IPR003100 GO:0005515
Arst1g03968 913 Pfam Piwi domain 557 876 IPR003165 GO:0003676
Arst1g03968 913 SMART Piwi_a_2 556 877 IPR003165 GO:0003676
Arst1g03968 913 ProSiteProfiles PAZ domain profile. 268 382 IPR003100 GO:0005515
Arst1g03968 913 MobiDBLite consensus disorder prediction 1 30 - -
Arst1g03968 913 FunFam Protein argonaute-2 261 387 - -
Arst1g03968 913 ProSiteProfiles Piwi domain profile. 556 877 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03968 Arst-Chr1 101190335 101200706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03968 54 913 Eukaryotic Initiation Factors Gene Family AT5G43810 73.272 0.0 1363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03968 K11593 - gmx:100808457 1632.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03968 1 101190335 101200706 Arst1g03968 1 101190335 101200706 ECH
Arst1g03968 1 101190335 101200706 Arst10g03620 10 103955881 103961316 PCT