Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03956 ATGCTCCGTCTATGGCGTCTTCGAAGAGTTAGTGCATTGTTTTCAAGGTTGGAAAAGGACAAAAGCTATAACTATTTTTGGGTTCGATGTGCCAAACTTATCTGTGTTACCCTATTTGCTGTACATTGTGCTGCATGCTTTTATTATCTTATCGCGGCTCGTTATCGTGATCCCAAAAGGACATGGATTGGAGCAACAATGGGAAATTTTCTTCAGAAGAGCTTGTGGACAAGATATGTTACATCTATTTATTGGTCAATTACTACCTTAACAACTGTTGGCTATGGAGATCTGCATCCAGTTAATTCAAGAGAGATGGTCTTTGACATCTTTTACATGCTTTTTAATTTGGGACTTACTGCATATTTGATTGGTAACATGACTAACTTAGTTGTCCATGGAACAAGCCGAACCCGAAAATTTAGAGACACCATACAAGCTGCCTCAAGTTTTGCTCAAAGGAATCAATTACCTATTCGTTTGCAAGACCAGATGCTTGCTCATTTGTGTTTGAAGTTTAGAACAGACTCCGAAGGGTTACAACAACAAGAGACAATTGATTCCCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTCTTCTATTCTCTGGTGGATAAAGTCTATTTATTTCGAGGCGTTTCAAATGATTTACTCTTTCAATTGGTTTCAGAGATGAAAGCAGAGTATTTTCCTCCTAAAGAAGATGTAATCTTACAGAATGAAGCTCCAACTGATTTCTACATACTAGTCACTGGTGCTGTGGAATTGGTAGTTCTTAAAAATGGCGTTGAGCAGGTTGTTGGAGAGGCAAATACAGGTGATCTTTTTGGTGAGATTGGTGTGCTTTGCTATAAGCCACAGCTCTTTACGGTTCGGACAAAGCGATTAAGCCAGCTTTTGAGACTAAACCGTACTGCTTTTCTAAATATTGTCAAGGCTAACGTAGGAGATGGAAATATTATTATGAACAATCTTCTTCAGCACTTAAAAGAACTAAATGACCCTATCATGGAGGGAGTTTTGGTGGAGACTGAGAATATGTTAGCTCGTGGTAGAATGGACCTACCAGTTGGTCTTTGTTTTGCAGCAGCAAGAGGAGATGACTTGTTGTTACATCATTTGTTAAAACGAGGATTGGATTCAAACGAATCAGATAGAAATGGAAGAACAGCTTTGCATATTGCAGCATCTAAAGGAAGTGAGAATTGTGTCATGCTTTTACTGGATTATGGAGCGGATCCCAATATTAGAGACTCTGATGGCAGCGTATCACTATGGGAAGCCATATTGGGTGGACATGAATCAGTAAGCCAGCTACTATTGGAAAATGGTGCTAACTTGAAAAGTGGTGATGTTGGTCAATTTGCATGCATCGCTGCTGAACAAAACACCCTCAACTTGCTCAAGGATATAGTGCGCTATGGTGGAGATGTCACGCTCCCTAGCACCACCTCCGGAACCACAGCTCTACATGTTGCAGTCTCTGAAGACAACGTAGAAGTTGTGAAGTTCTTGTTGGATCTTGGTGCCGACATTGATAAACCAGATAAGAACGGTTGGACACCAAGAGATCTAGCAGTCCAGCAAGGGCATCAAGACATCATAGCCATTTTTGAGTCTATTAAGGAGCCTAAGAATTGTCAACCTTTGGACCGTATTCCTGAGAAGGAAGGTAAGATAAAGAAGTTCCTTGGAAGATTTACAAGTGAACCAGCAATTCCTCTACCCCAAGAGAGCACATTTAGGGGTTCGGATGGGTTTAGGAGTTCGGACAGGTCTTGGAGCCAAAGCCGCCCAAGGCGGAGAAGCAGCAATAACTTCCACAACTCTTTGTTTGGGATAATATCAGCAGCAAACAAAGGGGAAAAGGACACGCTCTTTTATGTGAATGAAAATGGTAATGCAAAGAATGGTATGAAGAGTAGAGAATGGCCAACCAGAGTGGTGGTTAGTTTCCCTGAAAAGGGTGAGGCTGGTGGGAAACTTGTGTTGCTACCTGGAAGCTTTCAGGAGTTACTTGATATTGGGGCTGAGAAGTTTGGTGTGCGTCCTGCTAAGGTTCTATGCAAAGATGGGTTTGAAATTGAAGATATAGAGGTTATTAGGGATGGGGATCATCTTGTTTTTGAGAGTGCTGCTCAAAACTCTGACTATCCTACACCCACAATCGGTGTGCAACCGTAG 2190 0.4155 MLRLWRLRRVSALFSRLEKDKSYNYFWVRCAKLICVTLFAVHCAACFYYLIAARYRDPKRTWIGATMGNFLQKSLWTRYVTSIYWSITTLTTVGYGDLHPVNSREMVFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLAHLCLKFRTDSEGLQQQETIDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELVVLKNGVEQVVGEANTGDLFGEIGVLCYKPQLFTVRTKRLSQLLRLNRTAFLNIVKANVGDGNIIMNNLLQHLKELNDPIMEGVLVETENMLARGRMDLPVGLCFAAARGDDLLLHHLLKRGLDSNESDRNGRTALHIAASKGSENCVMLLLDYGADPNIRDSDGSVSLWEAILGGHESVSQLLLENGANLKSGDVGQFACIAAEQNTLNLLKDIVRYGGDVTLPSTTSGTTALHVAVSEDNVEVVKFLLDLGADIDKPDKNGWTPRDLAVQQGHQDIIAIFESIKEPKNCQPLDRIPEKEGKIKKFLGRFTSEPAIPLPQESTFRGSDGFRSSDRSWSQSRPRRRSSNNFHNSLFGIISAANKGEKDTLFYVNENGNAKNGMKSREWPTRVVVSFPEKGEAGGKLVLLPGSFQELLDIGAEKFGVRPAKVLCKDGFEIEDIEVIRDGDHLVFESAAQNSDYPTPTIGVQP 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03956 729 FunFam Potassium channel KAT2 199 335 - -
Arst1g03956 729 Pfam Ion transport protein 1 138 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst1g03956 729 SUPERFAMILY Voltage-gated potassium channels 2 168 - -
Arst1g03956 729 CDD CAP_ED 211 316 IPR000595 -
Arst1g03956 729 MobiDBLite consensus disorder prediction 584 604 - -
Arst1g03956 729 Pfam KHA, dimerisation domain of potassium ion channel 649 711 IPR021789 -
Arst1g03956 729 ProSiteProfiles Ankyrin repeat profile. 422 454 IPR002110 GO:0005515
Arst1g03956 729 SUPERFAMILY Ankyrin repeat 361 542 IPR036770 -
Arst1g03956 729 ProSiteProfiles KHA domain profile. 649 729 IPR021789 -
Arst1g03956 729 ProSiteProfiles Ankyrin repeat region circular profile. 487 519 - -
Arst1g03956 729 ProSiteProfiles Ankyrin repeat profile. 389 421 IPR002110 GO:0005515
Arst1g03956 729 Pfam Cyclic nucleotide-binding domain 231 315 IPR000595 -
Arst1g03956 729 PRINTS Ankyrin repeat signature 390 405 IPR002110 GO:0005515
Arst1g03956 729 PRINTS Ankyrin repeat signature 503 517 IPR002110 GO:0005515
Arst1g03956 729 Gene3D Jelly Rolls 176 336 IPR014710 -
Arst1g03956 729 SMART cnmp_10 211 328 IPR000595 -
Arst1g03956 729 Gene3D - 1 132 - -
Arst1g03956 729 Gene3D - 358 542 IPR036770 -
Arst1g03956 729 MobiDBLite consensus disorder prediction 575 604 - -
Arst1g03956 729 SUPERFAMILY cAMP-binding domain-like 136 331 IPR018490 -
Arst1g03956 729 ProSiteProfiles Ankyrin repeat profile. 487 519 IPR002110 GO:0005515
Arst1g03956 729 PANTHER POTASSIUM CHANNEL AKT1 1 714 IPR045319 GO:0005249|GO:0006813
Arst1g03956 729 ProSiteProfiles Ankyrin repeat region circular profile. 389 420 - -
Arst1g03956 729 ProSiteProfiles cAMP/cGMP binding motif profile. 211 313 IPR000595 -
Arst1g03956 729 Pfam Ankyrin repeats (3 copies) 460 539 IPR002110 GO:0005515
Arst1g03956 729 Pfam Ankyrin repeats (3 copies) 361 451 IPR002110 GO:0005515
Arst1g03956 729 SMART ANK_2a 487 516 IPR002110 GO:0005515
Arst1g03956 729 SMART ANK_2a 356 385 IPR002110 GO:0005515
Arst1g03956 729 SMART ANK_2a 389 418 IPR002110 GO:0005515
Arst1g03956 729 SMART ANK_2a 520 549 IPR002110 GO:0005515
Arst1g03956 729 SMART ANK_2a 422 451 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03956 Arst-Chr1 101001692 101006375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03956 1 713 Ion Channels AT2G26650 68.898 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03956 K21867 - gmx:100819491 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03956 1 101001692 101006375 Arst1g03956 1 101001692 101006375 ECH