Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03944 ATGGAGGACAGAAAAGTCAACACAATAGCCATCGTATCAGTGGTAACACTGATCATAGTGATCATGGTTGCTCGCATCGCGTTGAAGCTCTCAAAGGCCTTCTTCCTCATATGCGGTGCTGACGTGGCCGTGATCGTGGCCATCTTCTCCTTCGTCCTAATCAGAAACCGTTACAACAAACGGAGGAAGCAGTTAGAGTCACGGTTCAAGTCAGAAGGGAGAGAGCTCCGAATAGAGTACAGCTTCTTGCGCAAAGTGGCGGGCGTCCCAACTAAATTCCGTTACACGGAGCTCGAGGAAGCAACCGACGGTTTTCAAGCACTTCTTGGAAAAGGCTCCTCCGCAACGGTCTTCAAAGGGATCCTCAGCGACGGAACTTCCGTTGCCGTGAAGCGAATCGACGACGGAGCCGAAAGAGGCGAAAGAGAGTTCAGATCAGAGGTTGCAGCCATTGCTAGCGTTCAACACGTCAACCTCGTGCGTTTATATGGTTACTGCAATGCTCCTTCTTCACCAAGGTACCTTGTTTACGAGTACATATCAAACGGTTCGTTAGATTCTTGGATTTTTCCGAAAAAGGAAAGTGACAATAGTAGAAGAAGAGTTGGAGGGTGTTTGCCTTGGAGCTTAAGGTACAAAGTGGCAATCGATGTGGCGAAAGGACTTAGCTACCTCCACCATGATTGCAGGGCAAGGATTCTTCACCTTGATGTGAAGCCAGAGAATATACTCTTAGATGAGGGCTACAGAGCAGTTGTGGCGGATTTCGGGCTTTCGAAGCTGGTTGGAAAGGATGTTAGTCAAGTTATGACAACATTGAGAGGAACAAGAGGGTATTTAGCGCCTGAGTGGCTCTTGGAAAGAGGGGTTTCGGAGAAGACTGATATCTATAGCTATGGGATGGTTTTGTTGGAGATGATTGGAGGGAGAAGGAATGTTTGTAAGGTGGAAGATCCAAAGGACAAGAGTAAGAAGAAGTTGCAGTTTTTTCCAAAGATTGTGAATGAGAAAGTGAGGGAAGGGAAGTTGATGGAGATTGTGGATGAGAGATTACTGGTGGAGGGGGGTGGTGGTGTTGAGGAGAGTGAGGTGGTTAGGTTGGTGAATGTTGCATTGTGGTGCATACAAGAGAGGCCACGAATGAGGCCTAGTATGGCACAAGTTGCTGATATGCTTGAAGGGCGTGTCACAGTTGAGGAGCCACCAGATAGTAGAATGGTGCTTGTTGATTTGATATCTGAAGATGAAGATAACCCTGCAGTGCTGGATCACAATCAGAATAACATGGCAAGGTTATTGACATCTATGTCTAGTCATGAAGATTGTTCATCAACCTACTCAATGGGAACTACCACTATTCTATCTGGTAGATAG 1374 0.4672 MEDRKVNTIAIVSVVTLIIVIMVARIALKLSKAFFLICGADVAVIVAIFSFVLIRNRYNKRRKQLESRFKSEGRELRIEYSFLRKVAGVPTKFRYTELEEATDGFQALLGKGSSATVFKGILSDGTSVAVKRIDDGAERGEREFRSEVAAIASVQHVNLVRLYGYCNAPSSPRYLVYEYISNGSLDSWIFPKKESDNSRRRVGGCLPWSLRYKVAIDVAKGLSYLHHDCRARILHLDVKPENILLDEGYRAVVADFGLSKLVGKDVSQVMTTLRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEMIGGRRNVCKVEDPKDKSKKKLQFFPKIVNEKVREGKLMEIVDERLLVEGGGGVEESEVVRLVNVALWCIQERPRMRPSMAQVADMLEGRVTVEEPPDSRMVLVDLISEDEDNPAVLDHNQNNMARLLTSMSSHEDCSSTYSMGTTTILSGR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03944 457 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 28 403 - -
Arst1g03944 457 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Arst1g03944 457 Coils Coil 55 75 - -
Arst1g03944 457 ProSiteProfiles Protein kinase domain profile. 103 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03944 457 SMART serkin_6 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03944 457 FunFam Putative receptor-like protein kinase 70 179 - -
Arst1g03944 457 Pfam Protein kinase domain 108 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03944 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Arst1g03944 457 Gene3D Transferase(Phosphotransferase) domain 1 180 407 - -
Arst1g03944 457 Gene3D Phosphorylase Kinase; domain 1 64 179 - -
Arst1g03944 457 SUPERFAMILY Protein kinase-like (PK-like) 85 393 IPR011009 -
Arst1g03944 457 FunFam Putative receptor-like protein kinase 180 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03944 Arst-Chr1 100829948 100832077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03944 1 404 Receptor kinase-like Gene Family AT5G20050 66.256 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst1g03944 Pkinase 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03944 - - gmx:100779485 691.804