Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03925 ATGGACGAAGCTTCGTTGATGCGCAACACCGATTGCGTTTATTTCTTGGCATCTCCCCTCACTTGCAAGAAGGGAGCTGAATGCGAGTATCGGCATAATGAGATTGCGAGGCTTAACCCTAGGGATTGCTGGTACTGGTTATCTGGCAGTTGCCTTAATCCAACATGTGCTTTCAGGCACCCTCCATTGGATGGCCAGACTGGAGTTTCATCTGAGCCAACACAGTCTGCTGTGCCTGCAAATAAGACAATGGTTCCCTGTTATTTTTTCTTCAATGGATATTGCAATAAAGGCGACAGATGCTCATTTTTGCATGGGCATGATGAGAGCCATTTCACTGTAAAGCCTGTAAAGAATGACAAGGGAGGCACTGATCCACCCAACCTAGAGAATAAGGTGTTGTCAGGAACTGCCCCATCAACAACTGAAACTCATTCGAACCCATCGTTAACTGCCCCAAAGGCTTTGCCCACTTTCAAGCCTCCACCTAAGGAAGATCTTCAACTATCCTTACCAAAAAATGTTAAACAGCAAGGTGTTCCAGAAGAAAGATTTGTTGATAACATCTCTCAACGATGCAGTGAGCAGGGTTCAGAGGAGCAAGTAAATGGTCACATCGAGCCTGATGAACGTTGGGAATCATCATCCCCTGGATTTGATGTTCTTGTTCATGATGAATCGGCAAACTTGGGCTATGAGGAGGATCCTGAATATCTTCCTGATGGGGAACATGAGGAACTGAATGAACAATACTTGGGGTATGAATTTGAAAACCCAGTTGAGTATGATAATATGTGCCGCAAAGCTGACATCCTGTATGAACAAGAAATGTATGATGATTATAGACGTTTAGATAGAGATCTTACTCGTGCTAATGGCAGAAGAGTTTGTGATTGTTCCAGTGATATAATCTTAGATTCTATGTTGACTAGGAAAAGGATTCAGCTGAGTGATATAGCTACCTGTGACGGGAAGTTAGATCTACGAGACCATCTGAGAAGACGAAGGGAAAGTAGTGGTCCACCTGATGCGAGTTTCATCAGACGACATGAATCCTCTTCTTTGATGGTTCGAAACCGGGAAAGGCATCAAAGGCATTACAATGAACAGAGACTAAGGGGAAGATTGTCATCGCAAGTGGGAATTACCACTATAGACCCCATTGGAGAGGTTGAAACTCTTTCAATTGCTAACAAGCCAAGGTTATCTAGGAATTCCCAGCAGCATTGGCCAAGAAAGCATTATAGAGAAAAGCCATCTAAACGCCAGTTTCATTCATCTAATGACTCCAGGAGACCAGTTTTCAAGCAAAGGAGATTTGTTCACGAGTCCTCTACATTTTCAGGACCCAAGAGCCTTGCAGAAATTAGAGAAGAGAAGAAAAAGGCTGCAGGAAGTTTTCACTGCAAAAGCACATCACCTGATTTTCAGGACCCCAAACCTCTTAGTGAAATTCTCAAGGGCAAAAGGAGTGTGGACGGAGTTGGAGATGTCAATGTCTGCAGCAACTGA 1512 0.4378 MDEASLMRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGSCLNPTCAFRHPPLDGQTGVSSEPTQSAVPANKTMVPCYFFFNGYCNKGDRCSFLHGHDESHFTVKPVKNDKGGTDPPNLENKVLSGTAPSTTETHSNPSLTAPKALPTFKPPPKEDLQLSLPKNVKQQGDXPEERFVDNISQRCSEQGSEEQVNGHIEPDERWESSSPGFDVLVHDESANLGYEEDPEYLPDGEHEELNEQYLGYEFENPVEYDNMCRKADILYEQEMYDDYRRLDRDLTRANGRRVCDCSSDIILDSMLTRKRIQLSDIATCDGKLDLRDHLRRRRESSGPPDASFIRRHESSSLMVRNRERHQRHYNEQRLRGRLSSQVGITTIDPIGEVETLSIANKPRLSRNSQQHWPRKHYREKPSKRQFHSSNDSRRPVFKQRRFVHESSTFSGPKSLAEIREEKKKAAGSFHCKSTSPDFQDPKPLSEILKGKRSVDGVGDVNVCSN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03925 504 Gene3D - 72 132 - -
Arst1g03925 504 Gene3D - 2 63 - -
Arst1g03925 504 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Arst1g03925 504 MobiDBLite consensus disorder prediction 407 421 - -
Arst1g03925 504 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 494 - -
Arst1g03925 504 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Arst1g03925 504 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Arst1g03925 504 SMART c3hfinal6 81 107 IPR000571 GO:0046872
Arst1g03925 504 MobiDBLite consensus disorder prediction 334 354 - -
Arst1g03925 504 MobiDBLite consensus disorder prediction 400 436 - -
Arst1g03925 504 FunFam Zinc finger CCCH domain-containing protein 17 1 63 - -
Arst1g03925 504 SUPERFAMILY CCCH zinc finger 81 106 IPR036855 GO:0046872
Arst1g03925 504 ProSiteProfiles Zinc finger C3H1-type profile. 81 108 IPR000571 GO:0046872
Arst1g03925 504 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
Arst1g03925 504 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 84 106 IPR000571 GO:0046872
Arst1g03925 504 MobiDBLite consensus disorder prediction 422 436 - -
Arst1g03925 504 MobiDBLite consensus disorder prediction 130 153 - -
Arst1g03925 504 MobiDBLite consensus disorder prediction 115 168 - -
Arst1g03925 504 Pfam Zinc-finger containing family 8 64 IPR041686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03925 Arst-Chr1 100682064 100684978 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst1g03925 zf-CCCH_3 4.2e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03925 - - adu:107469835 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03925 1 100682064 100684978 Arst1g03925 1 100682064 100684978 ECH