Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03919 TCTGTTCGCTCGTTTCGGAACCTCAGACACTTCAACTTCTCCGGCAACAGTTTCCTCGAAGGCTCGACGCCGATTGTTCCACGACGCTTCATCTTCGCCGAGGACGACGGAGAGAGCAACGACGGCATAACCGCTCTCGCGCCATCTCCGAGATCAAACAAAAGGAGGAGGAGGAGCTACTTTCCCAGCGCTTCTTCTCCGGCTCCCGGACCGGCACCTCACCACCACCACAATCACAGGAGAAAGATTCTGGGATGGATCCTCGGTTTTCTGGCCGGAGCATTTGCAGGAATAATATCCGGTTTCATATTCTCATTGCTTTACAAACTGACAAAGGCATTACTGAAAAGAGGAGGCAAAGGCGCTGGCCCTGATATCTTCAGCCCTCTGATCAAGAAAGCCGAGGATTTGGCATTCTTGGAGAAAGAAGATGGTTTGGCGAACTTGGAACTCATCGGAAAAGGTGGCTCCGGCGAGGTTTACAAGGCGGAGTTACCAGGAAGCGACGGAAAAATGATTGCCATAAAAAAAATCATACAACCACCGAAGGATGCGAGTGAAATGGCGGAAGAAGAGAGCAGAGATTTGCATAAAAAGATGAGACAAATCCGGTCGGAAATCAACACAGTCGGCCATATCAGACACCGGAATCTGTTACCCCTTCTTGCTCATGTTTCCCGCCCTGATTCTCACCTCTTGATTTATGAATACATGAAGAATGGAAGCTTGCAAGATTTGTTACACAGAATTCAAGAGGGAAATCAGGAACTGGACTGGTTATCAAGGCACAAGATCGCCATTGGAGTAGCTTCTGGACTTGAGTACCTTCACATGAGTCATAGTCCAAGAATCATTCATAGAGATCTCAAACCAGGAAACATTCTTCTTGATGATGATATGGAAGCTAGGATCTCCGATTTCGGTCTTGCAAAAGCAATGCCTGATGCTCAAACTCACATTACTACTTCCAAAGTTGCGGGTACAGTTGGTTACATTGCACCAGAGTATCACCAGATTCTTAAATTCACTGATAAGTGTGACATTTTCAGCTTTGGGGTGGTGCTTGGAGTTTTAGTGACCGGAAAACTTCCCTCTGATGACTTCTTCCAACACACGGATGAGATGAGTATAGTGAAATGGATGAGGAAGGTTATCATCTCGGAGAATCCAAAGGAAGCCATTGATGAGAAGCTTCGTGGGAATGGTTTTGAGGAGCAAATGCTTCTTGTTCTTAAGATTGCATGCTTTTGCACTATGGATGATCCTAAGGAGAGACCTAATAGCAAGGATGTTAGGTGTATGTTAACTCAAATCAAGCATTGA 1323 0.4603 SVRSFRNLRHFNFSGNSFLEGSTPIVPRRFIFAEDDGESNDGITALAPSPRSNKRRRRSYFPSASSPAPGPAPHHHHNHRRKILGWILGFLAGAFAGIISGFIFSLLYKLTKALLKRGGKGAGPDIFSPLIKKAEDLAFLEKEDGLANLELIGKGGSGEVYKAELPGSDGKMIAIKKIIQPPKDASEMAEEESRDLHKKMRQIRSEINTVGHIRHRNLLPLLAHVSRPDSHLLIYEYMKNGSLQDLLHRIQEGNQELDWLSRHKIAIGVASGLEYLHMSHSPRIIHRDLKPGNILLDDDMEARISDFGLAKAMPDAQTHITTSKVAGTVGYIAPEYHQILKFTDKCDIFSFGVVLGVLVTGKLPSDDFFQHTDEMSIVKWMRKVIISENPKEAIDEKLRGNGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLTQIKH 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03919 440 Coils Coil 186 206 - -
Arst1g03919 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Arst1g03919 440 Gene3D Transferase(Phosphotransferase) domain 1 238 440 - -
Arst1g03919 440 ProSiteProfiles Protein kinase domain profile. 146 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03919 440 CDD STKc_IRAK 152 438 - -
Arst1g03919 440 ProSitePatterns Protein kinases ATP-binding region signature. 152 177 IPR017441 GO:0005524
Arst1g03919 440 Gene3D Phosphorylase Kinase; domain 1 135 237 - -
Arst1g03919 440 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 439 - -
Arst1g03919 440 FunFam Leucine-rich repeat receptor-like protein kinase 238 440 - -
Arst1g03919 440 Pfam Protein kinase domain 148 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03919 440 SUPERFAMILY Protein kinase-like (PK-like) 142 436 IPR011009 -
Arst1g03919 440 MobiDBLite consensus disorder prediction 41 76 - -
Arst1g03919 440 SMART serkin_6 146 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03919 Arst-Chr1 100614344 100615723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03919 2 440 Receptor kinase-like Gene Family AT2G31880 65.247 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Arst1g03919 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03919 - - adu:107469864 831.247