Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03914 ATGAGAGGGCCGCTTCTAGTTGCAAATAAGCACTTCTTCTGCCCCCGCGCCACGTGGCAAGGGTCGTGCCGGTTACTCAACCGCCCCTTCCGGTGCTTCAACTTCGACGCGTACGAATCTGTACCGGTGGAGGTTAGCGGCGACGAAGTTCCCCTGCCGGTGGAATCGTTCATGGAAACCGATTTCCACCAAGTTCTGAAGACGAACATCGAGCGGTGCAAGTACGTGAAGCCTACGCCGATTCAGCGACACGCCATTCCCATTGCTTCCGCCGGCCGTGACTTGATGGCGTGCGCGCAGACTGGGTCCGGTAAAACGGCGGCGTTTTGCTTCCCGATCATTTCTGTTATTCTTAAGAATCGTCGTCCGGGGTTTAATTCTGTGGTTCGTGATCGTGGCGGCACTGTTTCATATCCAACGGCACTTATTCTTTCTCCTACTAGAGAATTATCCTGCCAGATACATGATGAAGCGAAGAAGTTTGCTCATCAAACTGGAGTGAAGGTTGTTGTTGCTTATGGTGGAGCTGCAATAACTCAGCAGCTGCGGAATTTAGAGAAGGGTGTTGATATACTTGTTGCTACTCCTGGGAGGTTGGTGGATATCATTGAAAGAGGGAGGGTTTCTTTGACAAGGATAAAGATTCTTGCTTTGGATGAGGCTGATCGAATGTTGGACATGGGATTTGAGCAGCAGATACGCAAGATTGTTGAGCAGATGGACATGCCTCCACCTGGTGTTAGGCAAACTATGCTTTTCAGCGCTACATTCCCTGATGATATTCAGAAGCTTGCATCTGACTTTCTATCAAACTACATATTCCTATCTGTTGGAAGGGTTGGTTCTAGCACTGAATTGATTGTGCAGAAAGTTGAATATGTTGAGGATAATGAAAAGATTAACCATCTAGTGGATCTACTCCATGGTCAAAATGCACGTGGCGCCAACGGGAAGCCTGCTTTGACTCTTGTATTTGTTGAAACAAAGAGGGGAGCGGATATTTTAGAATCTACCTTGACGAGAAAAGGGTTTCGTGCTATTGCAATACATGGTGACAAAGTTCAAATGGAAAGGGAACGAGCTTTAAGATCCTTCAAAAAAGGTGCGACTCCTATCATGGTGGCGACAGATGTTGCTTCCAGAGGTTTGGATATCCCGCATGTGGCCCATGTCATCAATTATGATTTGCCAAGAAACATTGATGACTATGTTCATAGAATTGGCAGAACTGGCCGTGCTGGCAAATCTGGTTTTGCCACTGGCTTCTTCAGCTACAAGAACAATCATCTTGCAAAGCCTCTTGTTGACCTCTTGCAGGAAGCAAAGCAAGAAATTCCTTCTTGGCTGAGCCAATATGCTGGTGAGTCTTCACCATATGATGGCACTGGTGGTAGCCATCCATCTCAGCAGTATGGTGGCCGTGACTTCCGAAATGTTACTGAACCTGAAGTGGAGAATTATGACAACCACTCCACTACTTTTGGCGATTCATATAATGCTGATTATACATTTGACATAAAAGACTCCAATGAATATGCTGATTCGTCATCTTATGAGATGGCAAATTCAGTTCCTCCTGCTACCAGTTGTCATTATACTTATGCCAATACTGACTTGTATGGAGGTGGCAACGTTGAAGATGGTCCTGGAGGTTATGCATCGATTGTTGCAACTGGATGGGACTAG 1686 0.4632 MRGPLLVANKHFFCPRATWQGSCRLLNRPFRCFNFDAYESVPVEVSGDEVPLPVESFMETDFHQVLKTNIERCKYVKPTPIQRHAIPIASAGRDLMACAQTGSGKTAAFCFPIISVILKNRRPGFNSVVRDRGGTVSYPTALILSPTRELSCQIHDEAKKFAHQTGVKVVVAYGGAAITQQLRNLEKGVDILVATPGRLVDIIERGRVSLTRIKILALDEADRMLDMGFEQQIRKIVEQMDMPPPGVRQTMLFSATFPDDIQKLASDFLSNYIFLSVGRVGSSTELIVQKVEYVEDNEKINHLVDLLHGQNARGANGKPALTLVFVETKRGADILESTLTRKGFRAIAIHGDKVQMERERALRSFKKGATPIMVATDVASRGLDIPHVAHVINYDLPRNIDDYVHRIGRTGRAGKSGFATGFFSYKNNHLAKPLVDLLQEAKQEIPSWLSQYAGESSPYDGTGGSHPSQQYGGRDFRNVTEPEVENYDNHSTTFGDSYNADYTFDIKDSNEYADSSSYEMANSVPPATSCHYTYANTDLYGGGNVEDGPGGYASIVATGWD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03914 561 Gene3D - 30 276 IPR027417 -
Arst1g03914 561 SMART ultradead3 74 290 IPR014001 -
Arst1g03914 561 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 47 453 - -
Arst1g03914 561 FunFam ATP-dependent RNA helicase RhlB 278 457 - -
Arst1g03914 561 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 299 453 IPR001650 -
Arst1g03914 561 Gene3D - 277 456 IPR027417 -
Arst1g03914 561 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 428 IPR027417 -
Arst1g03914 561 CDD SF2_C_DEAD 287 423 - -
Arst1g03914 561 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 86 275 IPR014001 -
Arst1g03914 561 CDD DEADc_DDX3_DDX4 56 281 IPR044763 GO:0003724|GO:0005524
Arst1g03914 561 FunFam Probable ATP-dependent RNA helicase DDX4 24 277 - -
Arst1g03914 561 Pfam DEAD/DEAH box helicase 79 264 IPR011545 GO:0003676|GO:0005524
Arst1g03914 561 SMART helicmild6 333 414 IPR001650 -
Arst1g03914 561 Pfam Helicase conserved C-terminal domain 298 414 IPR001650 -
Arst1g03914 561 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 55 83 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03914 Arst-Chr1 100568804 100571965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03914 53 446 Eukaryotic Initiation Factors Gene Family AT3G19760 31.899 1.24e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03914 K11594 - gmx:100791226 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03914 1 100568804 100571965 Arst1g03914 1 100568804 100571965 ECH