Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03894 ATGATGGGTGCTAATGTTGCAGCGGCAACAGTGGCGCTCCTTCTTCTCATCACGACCATTTCGTCCTCATCGCAAGACCCACATCATAATCAGATACCACTTGGCTCAGCTCTTTACCCAACTACTCAGCCCACTTCATGGCTTTCCCCTTCTGGCCTCTTTGCATTTGGCTTTTTCCAGCAGCAGCAGGCCAATCATAATGGCGATTTTGCCCTTGGGATTTGGTTGGTTGACGGAAACAGAAGCAAAAACACAGTGGTATGGACTGCAACAAGCAATGATGATCCGCCACTCACCCCAAATGCAAAACTCGAACTAACCAAACAAGGTAAGCTTGTCCTGCAGACACAAGAGAGTAATCATCTTATTGTTAATACCAGTGAAACTGCTTACTCTGCCTCCATGCTTGATTCTGGAAACTTTGTTCTCTACGACCAGAATTCCACCATCATATGGCAGAGTTTTGACTACCCAACCGACACAATCTTGGGTGGCCAATCTCTAGGCTATGAAGCTCAACTACTCTCTGGTTTTGGCTCGTCAGCAAGTAGACGATTTATTCTCGCCATGCAGTTTGATGGCAATCTTGTTCTTTATCCAGGAGACACGGCAAAAAAACCCATCGATTCGTATTGGTCATCTGGAACTTCCTACATTCCCAGTTACAAGCATCTGTACCTTGATGCTAACCATGGCTCCCTGCTCATCAAGGACAAATCCAACCGCACCTTTCTTTATTCTGGTTCATCTTTGTCGGGAAGAGGAATCATAATATATCGTGCTACGTTGGATACTGATGGATTCTTCCGGTTGTATGCGCATGATATCAACAATGCCAACCTCGCCACTCTCGGGGCGTGGCCAGAAGGCAACAATTCTTGTTCGGTAAAGGGTATCTGTGGCCACAACAGCATCTGCGAATTCGATGGCAAGAAGCCACACTGTAAATGTCTTCCTGGATTCGACTATGTTGATCCCAAGCAACATTATATTGGTTGCAGAAGAAACATTTCCCAACCAAACTGCTCTGGCAAAGATTACATAGGGTTCTATAACATGGTTCCAGAGCCGAATTTGGTGTGGGCTGATCGTCCTTATTACGCCGCGGCCAAGAAGTCGCAGAAAGAAGAATGCGCATTCTCTTGTTTGGTGGATTGCAAGTGCTGGGCTGCTCTTTATACCAACGGGCTCTGCATCAGGCAAGAGCCCCCTCTCAGGTATGCTAGATCCACGGTGCAAGACGAACACTCCTCCGCGTTCTTGAAGGTCGGAAACATGACGCTCAATTCTCCTATGCCTGTGCCTGATCAACCACCTCAAAAGAGTAGTACCAGTAACAAAGCAATTCTACGTATTATTCTCGTTACCTCCATTTTCACTCTGATTTTCTGCTCCACTATTGGGATATCTTGCCATTTGATGTCGAAGATTCGAGTTCTCAAGTACAAGAGGCTCTTGGAGATTGGGGACTTGGGGCTGAATGAGGAAGTGGCTTTGAGGAGATTTTCATACACTGAGCTCAAGAGAGCAACCAATGGTTTCAAGCAAGAATTGGGAAAGGGCTCTTTTGGAGCAGTTTACAAAGGGGTTTTATACAAGGCGGGAAGAAGTAGGAGATTCATTGCGGTGAAGAGACTTGAGAAGTTGGTTGAAGATGGAGAAAAAGAGTTCCAAGCAGAGGTGAGAGCCATTGGAAAAACACACCACAGGAACCTTGTTCGCTTGCTTGGCTTCTGTGCCGAGGGTCCCAAAAGGCTTCTGGTCTATGAATACATGAGCAATGGTTCCCTTGGGAAGCTTCTCTTTGGCGATGAAAGGCTTCCAGATTGGGATGAAAGAGTCAGAATAGCTCTCGATATTGCAAGAGGGATCCTCTACCTGCATGAAGAATGTGAGGCACCCATCATCCATTGCGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCCAAAATATCTGATTTCGGGCTAGCAAAGCTTCTCATGCCGGATCAAACAAGAACCTTCACAGGGGTTAGAGGGACAAGAGGGTACTTGGCCCCTGAATGGAACAAGAACACACCAATAACAGTGAAGGCTGATATCTACAGCTATGGGATAGTGCTTCTTGAGACAGTGTGCTGCAGGAGAAACCTAGATGTTAATGTGTCAGAGCCAAATGAGATTCTTCTGTCTGGTTGGGCCTATAAGTGCTTTGTTGCTGGAGAGGTGCATAAGCTAGTTCATTGGGAAGAAGTGGATAAGAATGTTGTGGAAAATATGGTGAAGGTGGCACTGTGGTGTATCCAAGATGAACCTGTTCTCCGACCTTCAATGAAGAGTGTGGTGCTCATGCTTGAAGGGGTTACTGATGTGCCAGTTCCTCCTTCCCCAACTTCTATTTCCATGTGA 2400 0.4625 MMGANVAAATVALLLLITTISSSSQDPHHNQIPLGSALYPTTQPTSWLSPSGLFAFGFFQQQQANHNGDFALGIWLVDGNRSKNTVVWTATSNDDPPLTPNAKLELTKQGKLVLQTQESNHLIVNTSETAYSASMLDSGNFVLYDQNSTIIWQSFDYPTDTILGGQSLGYEAQLLSGFGSSASRRFILAMQFDGNLVLYPGDTAKKPIDSYWSSGTSYIPSYKHLYLDANHGSLLIKDKSNRTFLYSGSSLSGRGIIIYRATLDTDGFFRLYAHDINNANLATLGAWPEGNNSCSVKGICGHNSICEFDGKKPHCKCLPGFDYVDPKQHYIGCRRNISQPNCSGKDYIGFYNMVPEPNLVWADRPYYAAAKKSQKEECAFSCLVDCKCWAALYTNGLCIRQEPPLRYARSTVQDEHSSAFLKVGNMTLNSPMPVPDQPPQKSSTSNKAILRIILVTSIFTLIFCSTIGISCHLMSKIRVLKYKRLLEIGDLGLNEEVALRRFSYTELKRATNGFKQELGKGSFGAVYKGVLYKAGRSRRFIAVKRLEKLVEDGEKEFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGDERLPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPITVKADIYSYGIVLLETVCCRRNLDVNVSEPNEILLSGWAYKCFVAGEVHKLVHWEEVDKNVVENMVKVALWCIQDEPVLRPSMKSVVLMLEGVTDVPVPPSPTSISM 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03894 799 ProSitePatterns Protein kinases ATP-binding region signature. 518 544 IPR017441 GO:0005524
Arst1g03894 799 Gene3D Transferase(Phosphotransferase) domain 1 592 793 - -
Arst1g03894 799 SMART serkin_6 512 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03894 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 273 IPR036426 -
Arst1g03894 799 ProSiteProfiles Bulb-type lectin domain profile. 159 284 IPR001480 -
Arst1g03894 799 FunFam S-receptor-like serine/threonine-protein kinase 489 591 - -
Arst1g03894 799 Gene3D - 26 157 IPR036426 -
Arst1g03894 799 Pfam D-mannose binding lectin 85 172 IPR001480 -
Arst1g03894 799 SUPERFAMILY Protein kinase-like (PK-like) 498 783 IPR011009 -
Arst1g03894 799 Gene3D - 158 283 IPR036426 -
Arst1g03894 799 ProSiteProfiles Bulb-type lectin domain profile. 29 156 IPR001480 -
Arst1g03894 799 Gene3D Phosphorylase Kinase; domain 1 492 591 - -
Arst1g03894 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Arst1g03894 799 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 790 - -
Arst1g03894 799 ProSiteProfiles Protein kinase domain profile. 512 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03894 799 Pfam S-locus glycoprotein domain 257 322 IPR000858 GO:0048544
Arst1g03894 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 177 IPR036426 -
Arst1g03894 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 793 - -
Arst1g03894 799 Pfam Protein kinase domain 515 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03894 799 PIRSF SRK 2 799 IPR024171 GO:0004674
Arst1g03894 799 SMART blect_4 38 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03894 Arst-Chr1 100254788 100257418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03894 434 788 Receptor kinase-like Gene Family AT1G56120 41.389 8.97e-68 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst1g03894 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03894 - - adu:107470047 1558.89