Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03891 ATGAATACTCTTTCTGCAAGTGCCATTGGTATCTTCCTATTGCTCTTGTTCTTATGTTATGTAGGAAGAACAACAGAAACACAAGTTCCAGCTACAAACATAACACCAGGTTCCTTACTTCACCCTGCTACTTACCCTACTCACTGGTCCTCTTCTTCTGGCCAATTTGCATTTGGCTTTTATAAGCAAGGTAGTGGCTATGCCGTTGGAATCTGGTTGGTTGATGCGAAGAACAATACGGTGGTATGGACTGCAAACCGAGACGATCCACCAGTTACTTCAAATGCAACTCTACAGCTGACTGCACAAAGTAAATTTGTTGTGCAAACAGAGCAAGGAAAACAGAAGCTTATTGCCAAAGCAATTGCTTCCTCCGCTTCCATGCTCGATTCTGGAAACTTTGTACTATATAACCAGACTAAGGGTGTCATATGGCAGAGTTTCGATTACCCAACTGACACTATGTTGGGTGGTCAATCTCTACCTTCTGGAGGTCAATTGTTGTCTAGTTCTTCAGATACCAATCACTCAAGTGGACGATTTCGCCTCAAGATGCAGGATGATGGAGAATTCAGTCTGTATCCAGAATTCACAACTGACACGAGGAGGGATGCTTACTGGCCGTCAGATATATACCTTGGTGATAAGATAGTCAAAGGCAAAGCTTATCTTTACCTCAACAAAACAGGTTTGCTGGTGTCCAAGAATGGTAGCAATAGTGTTATTTCGAGCCATTATGGACCTTATTCTGGCGATAGTGTCGGCAGCAACCAGACCATTTATCGTGCAACCCTGGACCCTGATGGGGTTTTCAGGCTGTATGCTCATGATAAAGGTAGTGAGTCCAAGAAAGTTTCACAGTGGCCATGGGATGACGGATGTGAGGTAAAGGGTTACTGTGGCTTTAACAGCTACTGTACATTCAACGACGACAAACCGGACTGCTATTGTCTTGAAGGTTTCGACTTTATAGAGCCAGATCAACGCACTCTTGGCTGCAAAAGGAACTTCTCAATTGCAGAGTGTAGAGGTGAGAAAGGCAGCGCAGCTGCACCCTATTATAACATGGTCACAATGCTAGATATTCAATGGGAGGATCACGCTTATTTTGGGGCCTATATGGAGCACCAAGAAGAATGCTCTGATTCTTGTTTGGCTGATTGCAACTGTTGGGGTGCCCTTTATGAGAACGGGAACTGCTTGAAACAAGGGATGCCTTTCAGATATGTCTCAAGGAGAGTTGAAGGGTTCTCAGCCAACACAATGTTCTTAAAGGTGGGAAATATCACCCATAAAAACAGGAATCCTAATGATGTATTCATGCCTCTCCCAATCAGGAGTACTAGCAACAAAGCAGTTGTCACTATCATTGTCATCACATCGGTGTTCACTCTTCTTTTATGCTCAATGATCGCCATCTCTTGCCACCTGATTTACAAGATTCGAGTTCTAAGGCTTCAGAGGCAGATGGAGACTGGGAACTTAGGCCTAAATGAAGAAGTGGCCTTGAGAAGATTTTCATACAGTGAACTGAAGCGGGCAACAAATGGTTTCAAGCAAGAGCTGGGTAAGGGTTCTTTTGGAGCAGTCTACAAAGGCAGCTTATACAAAAGTAGAAGATCCATTGCAGTGAAGAGACTAGAGAAGCTAGTTGAAGAAGGAGAAAGAGAGTTCCAAGCAGAGGTGCGAGCCATCGGAAAAACACATCACAGGAACCTTGTTCGCTTGCTGGGATTTTGTGCCGAGGGTCCCAAGAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGAAAGCTCATCTTTGGGGGTGAAAAGCGTCCAGATTGGGATGAGAGAGTGAGAATAGCACTGGATATTGCAAGAGGGATCCTTTATCTCCATGAAGAGTGTGAGGCACCCATTATTCACTGTGACATAAAGCCTCAAAATATCTTGATGGATGAATTTTGGACCGCAAAAATATCTGATTTTGGTCTAGCAAAACTCTTAATGCCAGATCAAACAAGAACCTTCACAGGGATTAGAGGGACAAGAGGGTATGTGGCTCCAGAATGGCACAAGAACACCCCAATATCAGTGAAGGCAGATGTTTACAGCTATGGTGTTGTGCTGCTGGAAGTTATATGCTGCAGAAGGAACATCGAAATTAGTGTTTCTGTACCAGAGGAGATTCTTCTCTCTAGCTGGACCTATAACTGCTTTGTTGCTAAAGAGTTGCATAAGCTAGTTCCCAGGGAAATAGTGGATAAGAATGTTTTGGAAAATATGGTGAAGGTGGCACTATGGTGTATCCAAGATGAGCCTGCTCTCCGGCCAACAATGAAGAGTGTGGTGTTGATGTTAGAAGGGGTTACTGATGTAGCTATTCCTCCTTGTCCAACAACCTCTATTTCTATGTAA 2406 0.4385 MNTLSASAIGIFLLLLFLCYVGRTTETQVPATNITPGSLLHPATYPTHWSSSSGQFAFGFYKQGSGYAVGIWLVDAKNNTVVWTANRDDPPVTSNATLQLTAQSKFVVQTEQGKQKLIAKAIASSASMLDSGNFVLYNQTKGVIWQSFDYPTDTMLGGQSLPSGGQLLSSSSDTNHSSGRFRLKMQDDGEFSLYPEFTTDTRRDAYWPSDIYLGDKIVKGKAYLYLNKTGLLVSKNGSNSVISSHYGPYSGDSVGSNQTIYRATLDPDGVFRLYAHDKGSESKKVSQWPWDDGCEVKGYCGFNSYCTFNDDKPDCYCLEGFDFIEPDQRTLGCKRNFSIAECRGEKGSAAAPYYNMVTMLDIQWEDHAYFGAYMEHQEECSDSCLADCNCWGALYENGNCLKQGMPFRYVSRRVEGFSANTMFLKVGNITHKNRNPNDVFMPLPIRSTSNKAVVTIIVITSVFTLLLCSMIAISCHLIYKIRVLRLQRQMETGNLGLNEEVALRRFSYSELKRATNGFKQELGKGSFGAVYKGSLYKSRRSIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLIFGGEKRPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGIRGTRGYVAPEWHKNTPISVKADVYSYGVVLLEVICCRRNIEISVSVPEEILLSSWTYNCFVAKELHKLVPREIVDKNVLENMVKVALWCIQDEPALRPTMKSVVLMLEGVTDVAIPPCPTTSISM 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03891 801 Pfam S-locus glycoprotein domain 255 322 IPR000858 GO:0048544
Arst1g03891 801 SUPERFAMILY Protein kinase-like (PK-like) 501 784 IPR011009 -
Arst1g03891 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 211 IPR036426 -
Arst1g03891 801 Gene3D - 28 149 IPR036426 -
Arst1g03891 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 791 - -
Arst1g03891 801 ProSitePatterns Protein kinases ATP-binding region signature. 522 545 IPR017441 GO:0005524
Arst1g03891 801 ProSiteProfiles Bulb-type lectin domain profile. 36 149 IPR001480 -
Arst1g03891 801 CDD STKc_IRAK 522 785 - -
Arst1g03891 801 Coils Coil 544 564 - -
Arst1g03891 801 Pfam Protein kinase domain 519 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03891 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 44 795 - -
Arst1g03891 801 ProSiteProfiles Protein kinase domain profile. 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03891 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Arst1g03891 801 SMART serkin_6 516 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03891 801 Pfam D-mannose binding lectin 80 161 IPR001480 -
Arst1g03891 801 SMART blect_4 40 151 IPR001480 -
Arst1g03891 801 FunFam S-receptor-like serine/threonine-protein kinase 486 592 - -
Arst1g03891 801 FunFam Serine/threonine-protein kinase 151 286 - -
Arst1g03891 801 PIRSF SRK 3 801 IPR024171 GO:0004674
Arst1g03891 801 Gene3D Transferase(Phosphotransferase) domain 1 593 790 - -
Arst1g03891 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 279 IPR036426 -
Arst1g03891 801 Gene3D - 151 285 IPR036426 -
Arst1g03891 801 Gene3D Phosphorylase Kinase; domain 1 482 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03891 Arst-Chr1 100227262 100229990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03891 466 784 Receptor kinase-like Gene Family AT3G55550 39.879 1.81e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst1g03891 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03891 - - gmx:100815958 917.916