Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03890 ATGGCATCAACACCTGCTCTGTTATTGCTAGTGTTGTTGATGCTATTTGCAAATGAAACCACAGCTGAGACAAACCACACTCACCTCATTTCTATAGGGTCTGTGATATCTCCTACAGGCACGCACGCTTCATGGGCATCACGTTCTGGCCTCTTTGCTTTTGGCTTTTACCCCCATGGTAATAGCTATGCTGTTGGAATATGGCTGCTTAATCAACCTAACCACACAATTGTGTGGACTCATAATCGTGATAGTCCATCAGTGCCTTCAAATTCCACATTGAGATTGACCAAAGAAGGCGGGCTACTTCTTCTGCAAGGAAATGAAGACCCAGAGTTTCTCACTCCACTTTATTATTTATATCAGGCTAAAGTAGAAGTGGCTTCAGCATCTATGCTTGATTCTGGCAACTTTGTGCTTTATGATAAGAATTTTAGTATGTTATGGAGTAGTTTCCATAACTCAATGCCAAGTGACACCATATTAGGTGGCCAGAATTTGACAAGTGGAGCGAAGCTGGTCTCTAGTGTGTCACAATCAGACCATTCGAGTGGACATTTTTGGCTAAGAAGTCAGTTTGATTATGTACACCTAGCTGCTTGCCGTGTGAACAGCACATGTGAACCGGAGGATGCTTATTGGGCTAAAAACACATACTTTGAAGGTTATGGTTATCTACAGCTCAGTCTTAGCATTGAAGGTTCGCTTTGCCTACAAGATTATTCCTCTGGTTCTGAACTAGAGTGTTTAGCTAGTAGCAAGAACCTCACAGACAAGTCAAAGAATGCAACTTTTATCTACCGTGCTACACTTGATGAAGATGGGAACTTCAGATTGTATGCTCACCAATTCAAGGGAAATACTAGCTCAGGTGTGCAAACGCTGTGGAAAGCCGTGGAGGGGGATAAATGTCAAGTCCCGCTTTGTGGCTTGAACAGTTACTGCTTCATCAAGAGCGACAAAGCCATGTGTCAGTGTTATCCTGGTTTCATCCGTATCAAGAGTGGTGGTAACGATACCAGGTTTCTCGACTGCGAACAGAACCACAGCAAAGATAATTGTGAGAGCATAGAGGACCCAACAACGATGTACAATATGACTTCCTTGAAGGATATCTACTGGGGTGGTTCTCCTTATTTGGTTGTGCCAATGGAGATGGAAACTTGCAAGAAGTCTTGTCAGAAAGACTGTGATTGCAGGGCAGTGTTATATAAGAGCAGCATCTGCGAAAAATATAAGCTTCCACTTCTATATGGAAGAAGCTCTAAAGATGCATCAACGACGGCCTTCTTGAAGATGCCTTCAGGAATTGTCCTAAGTCCTACTTCAAACGAAACTGCTCTATCTTCAACAAAGCCCTCCCTCTTTGTTGATGACAAGAGAAGTCTTATAATGATTCTGTCCTTTACTCTGGGTTGGATTTCGTTTTTTGGTTTGGTCTTTGTATTGTATATTTTCATCATTTACAGGCGTCAAGTTCATAGGTATGCAATATTGTCTGCAAGTGAAAATCTGGGATTTGTAGAAGAATGTTCCTTGCGTTCATTTTCCTTTGATGAACTTGTGAAATCAACTGGAGGCTTTGCAGAGGAGATAGGCAGAGGATCTTTTGGAGCGGTTTATAGAGGCACAATAGGTGACAGTAACAGAATGGTTGCTGTGAGGAGACTTGAGAAATTTGTTGATGAAGGGGAGAGGGAATTCCAAGCAGAAATCACTGCCATTGCTCGAACTCATCATAAAAATCTGGTGAAGCTCATTGGTTTCTGCATTGATGGATCTAGGAAGCTTCTTGTTTTTGAATATCTCAGCAATGGGTCTCTTGCAGATCTTCTCTTCAAGTCTCATATGACTATGGCTTGGAAAGAGAGATTAAAGATTGCATTAGACGTGGCTAGAGGAGTCTTATATCTGCATGAGGAGTGTGATGTTCGGATTATCCACTGCAACATAAAGCCTCAGAATATACTCATGGATGAAATGTGGACTGCAAAGATATCCGATTTTGGATTTGCAAGGCTGTTGAAACCCAGCTATTCAAGAATGAAGAAAATGGATGACAAGAGAAGTAGGTACTTGGCACCTGAATGGCAGAAGGATGAATCAGTGTCAGTTAAAGCTGATGTTTATAGTTTTGGGGTGGTGTTACTGGAGATTGCATGCCGTAGAAGCAGTATTGATATGAATTGA 2190 0.4187 MASTPALLLLVLLMLFANETTAETNHTHLISIGSVISPTGTHASWASRSGLFAFGFYPHGNSYAVGIWLLNQPNHTIVWTHNRDSPSVPSNSTLRLTKEGGLLLLQGNEDPEFLTPLYYLYQAKVEVASASMLDSGNFVLYDKNFSMLWSSFHNSMPSDTILGGQNLTSGAKLVSSVSQSDHSSGHFWLRSQFDYVHLAACRVNSTCEPEDAYWAKNTYFEGYGYLQLSLSIEGSLCLQDYSSGSELECLASSKNLTDKSKNATFIYRATLDEDGNFRLYAHQFKGNTSSGVQTLWKAVEGDKCQVPLCGLNSYCFIKSDKAMCQCYPGFIRIKSGGNDTRFLDCEQNHSKDNCESIEDPTTMYNMTSLKDIYWGGSPYLVVPMEMETCKKSCQKDCDCRAVLYKSSICEKYKLPLLYGRSSKDASTTAFLKMPSGIVLSPTSNETALSSTKPSLFVDDKRSLIMILSFTLGWISFFGLVFVLYIFIIYRRQVHRYAILSASENLGFVEECSLRSFSFDELVKSTGGFAEEIGRGSFGAVYRGTIGDSNRMVAVRRLEKFVDEGEREFQAEITAIARTHHKNLVKLIGFCIDGSRKLLVFEYLSNGSLADLLFKSHMTMAWKERLKIALDVARGVLYLHEECDVRIIHCNIKPQNILMDEMWTAKISDFGFARLLKPSYSRMKKMDDKRSRYLAPEWQKDESVSVKADVYSFGVVLLEIACRRSSIDMN 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03890 729 Gene3D - 158 299 IPR036426 -
Arst1g03890 729 Pfam Protein tyrosine and serine/threonine kinase 529 721 IPR001245 GO:0004672|GO:0006468
Arst1g03890 729 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Arst1g03890 729 Gene3D Transferase(Phosphotransferase) domain 1 603 729 - -
Arst1g03890 729 PIRSF SRK 1 729 IPR024171 GO:0004674
Arst1g03890 729 ProSiteProfiles Protein kinase domain profile. 526 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03890 729 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 216 IPR036426 -
Arst1g03890 729 SUPERFAMILY Protein kinase-like (PK-like) 510 724 IPR011009 -
Arst1g03890 729 FunFam Os07g0541700 protein 603 689 - -
Arst1g03890 729 Gene3D - 37 154 IPR036426 -
Arst1g03890 729 FunFam S-receptor-like serine/threonine-protein kinase 497 602 - -
Arst1g03890 729 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 728 - -
Arst1g03890 729 Pfam D-mannose binding lectin 76 168 IPR001480 -
Arst1g03890 729 SMART blect_4 36 155 IPR001480 -
Arst1g03890 729 ProSiteProfiles Bulb-type lectin domain profile. 27 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03890 Arst-Chr1 100213372 100216204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03890 516 727 Trihelix Transcription Factor Family AT1G68690 43.458 4.92e-52 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst1g03890 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03890 - - aip:107630435 1345.1