Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03832 ATGGAGGTAGAGGATGATGACTGGGACTTGACCGCAGAAGAACTCGATTCTCTTGAACGCGACGCTTTCCAGAAAATTGCTCAACTTCGCGACTCTTCTACCCCTCCTTCTTCTCAACAATTCAATCTGCACCAACACCAACAACACCATTTTCCAAAACCACCTTCTGCCAACCATTCCCAACCCTTCCCACCAAACCCCATTTCGGATTCCCGTCCTCAAAGGGTGGACGCTTTGCCTCAAGGAGGTAAAGCATTACCCCCCTCATTGAAACCAGGGACAAAAAAGGATGAACCTTCTAAAGAACTGCCGAAGTTTTCCGTCAAATTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTTCACATGCTAACTTCATCAAGTTATGGATGTTCCCACTTTCTTCCTTGTCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGGTGGAGAATTTAGATCCTTTAGTGCACCGTGCCATTGTTTCTGCATCCGCTGTTCCAGATCTTCGAGATCGTTACGACAAGATCCCTAGTTACATTGAATCAAAGCTTTTACCATTTCAGAGAGAAGGTGTAAGGTTTATTTTACAACATGGAGGGCGTGCTCTTTTGGCAGATGAAATGGGACTAGGAAAAACTTTGCAGGCCATTGCTGTAGCTTCATGCATTCAGGAGTCATGGCCTGTTCTCATAATTGCACCATCATCATTGCGCCTGCAATGGGCTTCTATGATTCAACAATGGCTGAATCTTCCTTCTTCAGATATACTTATCGTCTTACCTCAAAGTGGTGGATCAAACAGAGGAGGCTTCAATATAGTATCCCCAAGTGCCAAAAGTAACATTCGTTTGGATGGACTCTTCAACATTATCTCATATGATTTGGTGCCAAAGCTACAGAATATGCTCACAACATTGGACTTTAAGGTTGTAATTGCAGATGAATCACACTATCTGAAGAATGCTCAGGCAAAGAGGACTACTGCAACTCTTCCTGTTATAAAGAAAGCTCAATACGCAATATTGCTTAGTGGAACTCCTGCTTTATCTCGACCAATAGAACTGTTCAAGCAGCTGGAAGCTTTGTATCCTGGCGTATATAAGAATGTTCATGAATATGGTAACCGATATTGCAAGGGTGGAGTTTTTGGAGTTTATCAAGGGGCAAGTAATCATGAAGAATTACACAATTTGATGAAGGCAACAGTGATGATACGAAGGCTTAAAAAAGATGTTCTTTCTCAACTTCCTGTAAAGCGTAGGCAACAAGTCTTCTTAGACTTAGCTGACAAGGACATGAAGCAAATTAACGCTTTATTCCGTGAGTTGGAGGTGGTAAAAGCCAAAATTAAGTCTGCCAAATCAAAAGATGAGGCTGAATCTCTTAAGTTTACTCAAAAAAATCTGATTAACAAGGTTTGCATGGAAGAATTTTTACTGCAACATTTTGTCAGGCCTTGGCCTATATGTGATGCTGTTCTTGAATATCTTGGAACTGTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCACATCATCAGCCAATGATAGATGCGATACATGAGTTCCTTCTTAGGAAAAGAGTGGGTTGCATCCGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTCTATCAAGGCAGCTGTGTTATCCATTAAAGCTGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTGCAGAACTATCCTGGACTCCAGGTGACCTAATTCAGGCCGAAGATCGTGCTCATAGAATTGGCCAGGTTTCTTCAGTAAATATATACTACTTGCTGGCAAATGATACGGTTGATGACATCATATGGGATGTGGTGCAAGTCAAACTGGATAATTTGGGGCAGATGTTAGATGGCCATGAGAATACCTTAGCTGTCTCAAATAATCAACCATTGAGTAGCCCATCAAAGCATACTACTATTGAGCATAGCCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAACGTGGATAGATCAGAACATCAGCCTGACCCAAAACGGCCGCGTCAGTCATGA 2121 0.4191 MEVEDDDWDLTAEELDSLERDAFQKIAQLRDSSTPPSSQQFNLHQHQQHHFPKPPSANHSQPFPPNPISDSRPQRVDALPQGGKALPPSLKPGTKKDEPSKELPKFSVKFFLHSSGHVAAKFQYDQVSHANFIKLWMFPLSSLSEAEKVLGEISNYKVQVENLDPLVHRAIVSASAVPDLRDRYDKIPSYIESKLLPFQREGVRFILQHGGRALLADEMGLGKTLQAIAVASCIQESWPVLIIAPSSLRLQWASMIQQWLNLPSSDILIVLPQSGGSNRGGFNIVSPSAKSNIRLDGLFNIISYDLVPKLQNMLTTLDFKVVIADESHYLKNAQAKRTTATLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPGVYKNVHEYGNRYCKGGVFGVYQGASNHEELHNLMKATVMIRRLKKDVLSQLPVKRRQQVFLDLADKDMKQINALFRELEVVKAKIKSAKSKDEAESLKFTQKNLINKVCMEEFLLQHFVRPWPICDAVLEYLGTVIEAGCKFLIFAHHQPMIDAIHEFLLRKRVGCIRIDGGTPAASRQQLVTDFQEKDSIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQVKLDNLGQMLDGHENTLAVSNNQPLSSPSKHTTIEHSPSKQRTLDQFVRRCDNVDRSEHQPDPKRPRQS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03832 706 Coils Coil 447 467 - -
Arst1g03832 706 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 504 655 IPR001650 -
Arst1g03832 706 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 204 376 IPR014001 -
Arst1g03832 706 CDD DEXHc_HARP_SMARCAL1 195 418 - -
Arst1g03832 706 FunFam Chromatin remodeling factor18 168 442 - -
Arst1g03832 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 418 IPR027417 -
Arst1g03832 706 SMART ultradead3 191 384 IPR014001 -
Arst1g03832 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 659 IPR027417 -
Arst1g03832 706 FunFam Chromatin remodeling factor18 453 701 - -
Arst1g03832 706 Pfam Helicase conserved C-terminal domain 508 612 IPR001650 -
Arst1g03832 706 CDD SF2_C_SNF 502 623 - -
Arst1g03832 706 MobiDBLite consensus disorder prediction 658 706 - -
Arst1g03832 706 MobiDBLite consensus disorder prediction 672 706 - -
Arst1g03832 706 Gene3D - 169 443 IPR038718 -
Arst1g03832 706 Pfam SNF2-related domain 213 476 IPR000330 GO:0005524|GO:0140658
Arst1g03832 706 MobiDBLite consensus disorder prediction 22 101 - -
Arst1g03832 706 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 4 697 - -
Arst1g03832 706 SMART helicmild6 529 612 IPR001650 -
Arst1g03832 706 Gene3D - 499 696 IPR027417 -
Arst1g03832 706 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03832 Arst-Chr1 99480638 99487611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03832 509 652 RAD5 or RAD16-like Gene Family AT1G11100 34.028 9.27e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst1g03832 SNF2_N 9.9e-29 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03832 K14440 - gmx:100778246 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03832 1 99480638 99487611 Arst1g03832 1 99480638 99487611 ECH