Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03827 ATGGAAGGCAAAATTGCATTCAAGAATTTGCTTCAAGTTCAAGAATTTGCATTGAATTCCACTCATGATTCCTCCTCTGTTAGTAATAATACTCTAGGATCTACTCTTCTGAGTTTGAGCTTGAATCCTCAACAAAATCAAGATCAGTCTCATACCCAATTGGAAGTGCTGAAAAAGAAGCTAGAGGAAGTGAAGAAGGAGAATCAGAATCTAAGAATTATGCTGAATCAGATTAGAGAACACTATGGAGTTCTTCAAAATCAGTTATTGCTGGCGATGCAGTGCCACCAATTATCTTCATCCTCGCCTACAATAATTAATCATGACCTCAAGAATGACAATAGAGAAGAAATCTTGGAGAGAAAAATGTTACCCACCACCCAGAAATTTGGTTTTGATGTTAAGAATGAAATGAGTAAGCACATAGCATCACAAGAAGCAAAAATATTGAAGGATCAAGTACCATCATTTGAAGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGAGCAAGATCAAATTTTTCTATGATGGTTGATGGGTGCCAATGGAGAAAATATGGACAAAAAACATCAAAGGGCAATCCTTGTCCTCGAGCCTACTATCGTTGTAGCATGGGACAAACATGTCCAGTTCGTAAGCAGGTGCAAAGATGCGCAATGGATGAGAGAGTTGTGATAACAACGTACGAGGGGAATCACAATCATCCACTACCAGAAGCAGCAAGATCCATAGCCACCACAACAACATCAGCATTGAACATGTTCCTTTGTGGCTCCATGACCACCACCACAACTAGTAGTACTTCACTTTCACTATCTTCTACTTCATCATCATCATGTCCTACTCTAACACTCGACTTAACTACTCAACAACCCTCCAATGATATTATTGCATCAAAGCACACACAACAACCATTACTATTCCCTCTGCCTCTAAATGCTTGCTATACTCAAGAAAACAACCTTGCCTTGGTGGATCTTGTTACTGCAGCTTTAACCAACGATCCTTCTCTTAAGGAAGCATTACTTGCAGCTTTTTCCTCTCTCACTCACAATAATGAACATGTTTAG 1071 0.3931 MEGKIAFKNLLQVQEFALNSTHDSSSVSNNTLGSTLLSLSLNPQQNQDQSHTQLEVLKKKLEEVKKENQNLRIMLNQIREHYGVLQNQLLLAMQCHQLSSSSPTIINHDLKNDNREEILERKMLPTTQKFGFDVKNEMSKHIASQEAKILKDQVPSFEASCKKARVSIRARSNFSMMVDGCQWRKYGQKTSKGNPCPRAYYRCSMGQTCPVRKQVQRCAMDERVVITTYEGNHNHPLPEAARSIATTTTSALNMFLCGSMTTTTTSSTSLSLSSTSSSSCPTLTLDLTTQQPSNDIIASKHTQQPLLFPLPLNACYTQENNLALVDLVTAALTNDPSLKEALLAAFSSLTHNNEHV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03827 356 ProSiteProfiles WRKY domain profile. 172 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03827 356 Gene3D WRKY domain 161 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03827 356 SUPERFAMILY WRKY DNA-binding domain 171 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03827 356 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 43 350 IPR044810 GO:0003700
Arst1g03827 356 Coils Coil 47 81 - -
Arst1g03827 356 SMART WRKY_cls 177 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03827 356 Pfam WRKY DNA -binding domain 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03827 Arst-Chr1 99439363 99442116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03827 57 288 WRKY Transcription Factor Family AT4G04450 37.954 6.53e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst1g03827 WRKY 8.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03827 - - ahf:112722714 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03827 1 99439363 99442116 Arst3g05085 3 126176281 126178593 PCT