Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03821 ATGGAAGAAATGGTGATGGCAACATTGGACCTAATAACTGCATCTCCTCATTCATCTTCATCTTCTTCATCTTCACCCACCACTGATAATAATAACAACCACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCACTTTGTCTCTCAAGCATCTCAACAAGAAGAACCGATTTGAGCACCGACCTCAGACTTGGCCTTAGTCTCTCTCCTTCTCATTATTCAACACCATCAAGCAGGGAACAAAGAAGTAGTTTTGATTGGCCACCAGTGAAGTCAACATTGAGGTGCACCCTTGTTGAGAAAAGTCAAATATCTCAGTTTGTTAAAGTATACATGGAAGGCATCCCCATCGGTAGGAAGCTCAATCTGCTGGCACACCATAATTATCATGCTCTTGTTAAGGCTCTTGCCAACATGTTCAGAACTACCATACTCTGCCCTGACTCTCATCAATTACCACTCATCTCTGGGAATAATGTTCATGTTCTTACTTATGAGGATCAAGAAGGGGATTGGATGATGGTTGGAGATGTTCCATGGGAGATGTTCTTGACAAGTGTGAAGAAGTTGAAGATCACAAGAGCTGACAGATGTTAA 597 0.4171 MEEMVMATLDLITASPHSSSSSSSSPTTDNNNNHPSSSSSSSSSSLCLSSISTRRTDLSTDLRLGLSLSPSHYSTPSSREQRSSFDWPPVKSTLRCTLVEKSQISQFVKVYMEGIPIGRKLNLLAHHNYHALVKALANMFRTTILCPDSHQLPLISGNNVHVLTYEDQEGDWMMVGDVPWEMFLTSVKKLKITRADRC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03821 198 Pfam AUX/IAA family 86 194 IPR033389 -
Arst1g03821 198 SUPERFAMILY CAD & PB1 domains 105 192 - -
Arst1g03821 198 Gene3D - 100 198 - -
Arst1g03821 198 MobiDBLite consensus disorder prediction 12 46 - -
Arst1g03821 198 ProSiteProfiles PB1 domain profile. 105 197 IPR000270 GO:0005515
Arst1g03821 198 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 58 196 IPR003311 GO:0005634|GO:0006355
Arst1g03821 198 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03821 Arst-Chr1 99335480 99337919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03821 89 192 B3 DNA Binding Superfamily AT1G59750 35.238 1.36e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Arst1g03821 AUX_IAA 5.9e-31 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03821 K14484 - gmx:100527448 191.43