Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03796 ATGGTAGTTGAGGAAAGTATAGATGGAGATATTACTTCATGTGAGGTGACAGGATCAGTAAGTCATTCACAGATTCCAAATCACGAAAATTCGCAAGAAATTAAGGGAAGGGAGGAGGCTCCAAAGAAGAACAAGGCCAAAACTGAAAGCAATAAAACAGTACCCTTTTACAAGCTTTTCTCATTTGCAGATTCTTGGGATCATTTGCTTATGTTTGTTGGGACAATAAGTGCAGTTGGGAATGGAATATCCAACCCTTTAATGAGTGTACTAATTGGAGATACAATTGATGCTTTTGGAAGAAATGGTAGCAATAAACAAGTTGTTCATGAAGTTTCCAAGGTCTCTCTGAAGTTTCTATGCTTGGGTATAGCTGCGTTGTTTGCAGCATTTTTGCAGGTTTCTTGTTGGGTGATCACTGGGGAGAGACAAGCTGCAAGAATAAGAGGCTTATACCTCAAAGCAATTCTGAGACAAGATGTCGGCTTCTTCGACAAGGAAACTAACACCGGCGAGGTTACTGAAAGGATGTCAGGAGACACATTTCTTGTTCAAGAAGCCATGGGGGAAAAGATGGCATCTCGTGGACAAGCAGCATATTCTGAAGCAGCAACTATATTTGACAGGACTATTGGTTCAATTAGAACTGTTGCATCCTTTACTGGTGAGGATCAAGCTATAGCTTTATACAATGAATCCTTAACCAAAGCATATAGGAGTGGTGTGCAAGAAGGAGTGGCTGCTGGTTTAGGCCTTGGTTTGCTTCGATTGCTCGCTTTCAGCAGTTATGCTTTGGGTGTATGGTATGGAGGGAAGATGGTTCTAGAGAAAGGATATACAGGAGGTGAAGTCATGAGTGTGTTTTTTGCAGTATTGATTGGATCATTGTCTCTGGGGCATGCATCTCCAAGCTTAACTGCAATTGCTGCAGGACAAGCAGCAGCCTATAAAATGTTTGAAACAATAAAGAGACAGCCGGATATTGATTCTTATGACACGGCTGGTCGGAAGCTAGATGATATTTCCGGAGATATAGAACTTAGAGAGGTTTGCTTTAGTTATCCTACAAGACCAGATGAACTCATATTCAATGGATTTTCCATTTCAATATCAAGTGGCACTACTGCAGCTTTGGTAGGACAAAGTGGGAGTGGGAAATCAACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGGCTGGTGAAGTTCTCATTGATGGTATCAACCTCAGAGAATTTCAACTGAAATGGCTCAGACAGAAGATAGGCCTAGTTAGCCAGGAGCCGGTTCTGTTTTTGTGTAGCATTAAAGAGAATATTGCATATGGTAAGGATGGTGCAACAGATGAAGAAATCATAGCTGCAGCAGAACTTGCTAATGCTGCTAGATTCATAGATAAATTTCCTCATGGACTCGACACGATGGTTGGTGAGCATGGAACTCAGCTTTCTGGGGGACAAAAGCAAAGGATTGCTATAGCAAGAGCAATTCTGAAAGATCCTAGAATCTTATTACTTGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAGTGGTTCAAGAGACACTAGATAGAATAATGGTTAACAGAACAACTGTTATTGTAGCGCATCGCTTAATCACAATAAGAAATGCTGACACGATTGCTGTTATTCATCAAGGAAAAGTTGTAGAAAAAGGTTCACATGATGAGCTCATTAAGGATCCTAATGGAGCTTTTAGCCAGCTTATTAGACTCCAAGAAATAAAAAAGGAGACAGAACAGAATGATGAATGCTCTGCAGATTCTGGACGGCAATCAAGCCGAGGATCATCCGAAATTGGAAACAGCAATCATCACTCATTCAGAATAACAGATGCTATGACATCAGAAGGAGGACCTGAAGTTCTTCCTTCAGCAGCATTATCACCAACACCTCCAGAAGTTCCATTTTTCAGGCTTGCTTGTCTTAACAAGCCTGAAATCCCAGTTTTACTCTTAGGGACATTGGTAGCAGTTATATGTGGAACTATTACACCTGCTCTGGGGCTTGTAGTCTCTAAAATGATAAACACTTTCTTTGAACCTGCGGATAAACTCCGCAAAGATTCAAAGCATTGGGCATTAGTATTTGTTGCTTTTAGTGTGGCTGCATTCATATTTCATCCATTGAGGTCCTACTTCTTTTCTGTGGCTGGTTCTAAGTTGATAAAAAGGATTCGGCTTATGTGTTTTGATAAAATAATTCACATGGAAGTAGGATGGTTTGACAAAGCTGAGAATTCAAGTGGAGCCCTTGGAGCAAGGTTGTCAATTGATGCTGCTTCGCTTCGCGCTTTGTTTGGAGATGCACTTGGTATGTTGGTTCAAGATGCTTCCACTGCAGTTACAGCCTTGGTGATTGCATTCGAGGCGAATTGGCAGCTAGCTCTCATTATCCTTGCTATGATGCCTCTTCTGTTGTTAAATGGACATTTACAAATCAGATCCATGAGAGGATTTAGTGCAAATGCAAAGAAACAATATGAGGAAGCAAGTCAAGTAGCAAATGATGCAGTAGGGAATATCAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTAATGGAGTTATATCAGAAGAAATGTGAAGGACCAATGCAAACAGGCATAAGGCAAGGTTTAGTGAGTGGAAGTGGTTATGGCCTATCAATCTTCTTTCTGTTCTGTGTCTATGGATGCAGTTTCTACGCCGGTGCCAGGCTTGTTAAGGATGGCAAAACAACAATGTCAGAAGTTTTCCGAGTATTTTTTTGTCTCACAATGACTGCTATAGCATTATCTCAGTCTGGCCTACTCGCCCCGGGCGCAAGCAAAGCAAAAAGTTCAGCTGCTTCTGTGTTTGCCATTCTTGATCAGAAATCAAAAGTAGACTCCAGTGATAAGTCTGGAATCACATTGCAAGATGTGAAGGGAGAGATTAAATTCAACCATGTCACTTTCAAGTATCCAACTAGGCCTAATGTTCATATATTCACAGATCTTTCCTTAACCATTCATCCAGGACAGACAGTGGCTCTAGTTGGAGAAAGTGGGAGTGGAAAGTCAACAGTAATATCATTGCTGCAAAGATTTTATGAACCAGATTCAGGTGAGATAACTCTAGATGGAACAGAAATCAAGAAGCTACAACTGAAATGGTTTAGGGAGCAAATGGGGCTAGTAAGCCAGGAGCCTGTGTTGTTCAATGACACCATTAGAGCCAACATTGCATATGGAAAGGGAGGGAATGCAACAGAAGCAGAAATTGTTGCTGCTGCACAACTTGCTAATGCTCACAAATTCATTAGCAGTTTGCACAAGGGTTATGAGACAATAGTAGGAGAGAGAGGGATTCAAGTATCAGGGGGTCAGAAGCAGAGGGTGGCAATAGCAAGAGCCATAGTGAAGAGTCCAAAGATATTGCTTCTAGATGAAGCAACAAGTGCACTAGATGCTGAGTCAGAAAAGGTGGTTCAGGATGCACTTGACAGGGTTATGGTAAACAGAACCACCATTGTGGTGGCACATAGGTTATCAACCATTAAGGGTGCACATTTAATTGCTGTGGTTAAAAATGGTGTCATTGCTGAGAAAGGCACACATGATGCTTTGCTCAAAAAGGGTGGCACCTATGCTTCCTTAGTAGCATTCTTCTCAAGTTCTAGTTCATCTTAA 3684 0.4134 MVVEESIDGDITSCEVTGSVSHSQIPNHENSQEIKGREEAPKKNKAKTESNKTVPFYKLFSFADSWDHLLMFVGTISAVGNGISNPLMSVLIGDTIDAFGRNGSNKQVVHEVSKVSLKFLCLGIAALFAAFLQVSCWVITGERQAARIRGLYLKAILRQDVGFFDKETNTGEVTERMSGDTFLVQEAMGEKMASRGQAAYSEAATIFDRTIGSIRTVASFTGEDQAIALYNESLTKAYRSGVQEGVAAGLGLGLLRLLAFSSYALGVWYGGKMVLEKGYTGGEVMSVFFAVLIGSLSLGHASPSLTAIAAGQAAAYKMFETIKRQPDIDSYDTAGRKLDDISGDIELREVCFSYPTRPDELIFNGFSISISSGTTAALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLREFQLKWLRQKIGLVSQEPVLFLCSIKENIAYGKDGATDEEIIAAAELANAARFIDKFPHGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMVNRTTVIVAHRLITIRNADTIAVIHQGKVVEKGSHDELIKDPNGAFSQLIRLQEIKKETEQNDECSADSGRQSSRGSSEIGNSNHHSFRITDAMTSEGGPEVLPSAALSPTPPEVPFFRLACLNKPEIPVLLLGTLVAVICGTITPALGLVVSKMINTFFEPADKLRKDSKHWALVFVAFSVAAFIFHPLRSYFFSVAGSKLIKRIRLMCFDKIIHMEVGWFDKAENSSGALGARLSIDAASLRALFGDALGMLVQDASTAVTALVIAFEANWQLALIILAMMPLLLLNGHLQIRSMRGFSANAKKQYEEASQVANDAVGNIRTVASFCAEEKVMELYQKKCEGPMQTGIRQGLVSGSGYGLSIFFLFCVYGCSFYAGARLVKDGKTTMSEVFRVFFCLTMTAIALSQSGLLAPGASKAKSSAASVFAILDQKSKVDSSDKSGITLQDVKGEIKFNHVTFKYPTRPNVHIFTDLSLTIHPGQTVALVGESGSGKSTVISLLQRFYEPDSGEITLDGTEIKKLQLKWFREQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIVAAAQLANAHKFISSLHKGYETIVGERGIQVSGGQKQRVAIARAIVKSPKILLLDEATSALDAESEKVVQDALDRVMVNRTTIVVAHRLSTIKGAHLIAVVKNGVIAEKGTHDALLKKGGTYASLVAFFSSSSSS 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03796 1227 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 983 1220 IPR003439 GO:0005524
Arst1g03796 1227 CDD ABC_MTABC3_MDL1_MDL2 345 583 - -
Arst1g03796 1227 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 662 948 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g03796 1227 ProSitePatterns ABC transporters family signature. 1123 1137 IPR017871 GO:0005524|GO:0016887
Arst1g03796 1227 SMART AAA_5 372 558 IPR003593 GO:0016887
Arst1g03796 1227 SMART AAA_5 1010 1203 IPR003593 GO:0016887
Arst1g03796 1227 CDD ABC_MTABC3_MDL1_MDL2 983 1218 - -
Arst1g03796 1227 FunFam ABC transporter B family member 1 973 1222 - -
Arst1g03796 1227 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 306 - -
Arst1g03796 1227 Gene3D - 973 1224 IPR027417 -
Arst1g03796 1227 Gene3D ABC transporter type 1, transmembrane domain 50 191 IPR036640 GO:0005524|GO:0016020
Arst1g03796 1227 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 345 581 IPR003439 GO:0005524
Arst1g03796 1227 Gene3D - 343 609 IPR027417 -
Arst1g03796 1227 Gene3D - 343 609 IPR027417 -
Arst1g03796 1227 MobiDBLite consensus disorder prediction 31 47 - -
Arst1g03796 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 583 IPR027417 -
Arst1g03796 1227 FunFam ABC transporter B family member 1 641 949 - -
Arst1g03796 1227 Gene3D ABC transporter type 1, transmembrane domain 192 939 IPR036640 GO:0005524|GO:0016020
Arst1g03796 1227 FunFam ABC transporter B family member 1 335 584 - -
Arst1g03796 1227 Gene3D ABC transporter type 1, transmembrane domain 192 939 IPR036640 GO:0005524|GO:0016020
Arst1g03796 1227 MobiDBLite consensus disorder prediction 588 616 - -
Arst1g03796 1227 SUPERFAMILY ABC transporter transmembrane region 649 963 IPR036640 GO:0005524|GO:0016020
Arst1g03796 1227 Pfam ABC transporter 364 512 IPR003439 GO:0005524
Arst1g03796 1227 SUPERFAMILY ABC transporter transmembrane region 52 329 IPR036640 GO:0005524|GO:0016020
Arst1g03796 1227 Pfam ABC transporter transmembrane region 71 192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g03796 1227 Pfam ABC transporter transmembrane region 196 296 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g03796 1227 Pfam ABC transporter transmembrane region 661 933 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g03796 1227 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst1g03796 1227 Pfam ABC transporter 1002 1151 IPR003439 GO:0005524
Arst1g03796 1227 MobiDBLite consensus disorder prediction 17 47 - -
Arst1g03796 1227 CDD ABC_6TM_Pgp_ABCB1_D2_like 653 966 - -
Arst1g03796 1227 MobiDBLite consensus disorder prediction 596 616 - -
Arst1g03796 1227 ProSitePatterns ABC transporters family signature. 484 498 IPR017871 GO:0005524|GO:0016887
Arst1g03796 1227 PANTHER ABC TRANSPORTER B FAMILY 644 1220 IPR039421 -
Arst1g03796 1227 PANTHER ABC TRANSPORTER B FAMILY 644 1220 IPR039421 -
Arst1g03796 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 972 1219 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03796 Arst-Chr1 99159638 99165544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03796 10 583 Calmodulin-binding Proteins AT2G36910 35.975 8.86e-107 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03796 K05658 - gmx:100777713 1761.12