Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03778 ATGGAACTTTCGAGTCAAGAAGGAGATATACCAATCGCAGTAAACACCACCGCCAATTATGGTGGCAATGGCCATGGCGCCCACATCAACATTCACCACACCCAAAACCCTTCCAATGGCTCCTCTATGCACCCGCTCGACAATGGACCCTACAATAGCAAGCAGGAGGAGGAAGAGGAGGAGGAGGTGGTGGTGCCGCTCGTCAGGTACAGAGAGTGCCTCAAGAACCATGCCGCCGCCATGGGAGGAAATGCCACCGACGGTTGTGGCGAGTTCATGCCAAGCGGAGACCACGGAACCATGGAAGCCCTCACCTGCTCCGCCTGCCGCTGCCACAGAAACTTCCACCGAAAGGAAATCCAAGGGGAGCCCTCAGCCCCACCCCCGCCCTTGCTGGAGTACCACCACCACCACTTCAACACCGCCACCAGGCACCTCGCCGCTTCTAGAAAGTTCCTTCACAAGAACATGCACCATCATCATCATCTCGGTTACCCTACTGCCGGCGGCGGTAACATCCTTTCCGCTTACTATCACCACCCGTCCGCAGCACCTCACATGCTACTTGCCCTCTCCGGCGCTGGCATCGCGGCGCCGCCGGAGAGCACCGCGGCACCAATTTCCGCCGCCGCAGCTTTAGCGTCTCCGAGGAAGAGGTTCAGGACGAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCTGGCTTTTGCGGAGAAGGTTGGTTGGAAGATTCAGAAGCAAGAAGACTCGGTTGTTCAGAACTTCTGCAACGAGATTGGAGTCAAACGCAGAGTCCTCAAGGTTTGGATGCATAACAATAAACACAACCTCGCTAAAAAAAACCTTCTCATCATTCCCCCATCCTCTTCTACTTAA 873 0.5556 MELSSQEGDIPIAVNTTANYGGNGHGAHINIHHTQNPSNGSSMHPLDNGPYNSKQEEEEEEEVVVPLVRYRECLKNHAAAMGGNATDGCGEFMPSGDHGTMEALTCSACRCHRNFHRKEIQGEPSAPPPPLLEYHHHHFNTATRHLAASRKFLHKNMHHHHHLGYPTAGGGNILSAYYHHPSAAPHMLLALSGAGIAAPPESTAAPISAAAALASPRKRFRTKFSQEQKEKMLAFAEKVGWKIQKQEDSVVQNFCNEIGVKRRVLKVWMHNNKHNLAKKNLLIIPPSSST 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03778 290 NCBIfam homeobox domain, ZF-HD class 217 273 IPR006455 -
Arst1g03778 290 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 46 276 - -
Arst1g03778 290 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 69 120 IPR006456 -
Arst1g03778 290 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 119 IPR006456 -
Arst1g03778 290 FunFam Zinc-finger homeodomain protein 2 205 278 - -
Arst1g03778 290 SUPERFAMILY Homeodomain-like 212 278 IPR009057 -
Arst1g03778 290 Gene3D - 206 279 - -
Arst1g03778 290 MobiDBLite consensus disorder prediction 24 49 - -
Arst1g03778 290 MobiDBLite consensus disorder prediction 24 60 - -
Arst1g03778 290 Pfam ZF-HD protein dimerisation region 68 120 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03778 Arst-Chr1 98962082 98963603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03778 1 280 ZF-HD Transcription Factor Family AT1G14440 46.026 2.84e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst1g03778 ZF-HD_dimer 6.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03778 - - aip:107619596 372.089