Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03771 ATGGAAGGGATACCGCACCCACTACCCAGAACTGTTGAGGAGGTTTTCAGCGACTTTAAGGGCAGGCGAGCTGGATTGATCAAAGCCCTAACCACTGATGTTGATAAGTTCTACCAGCAGTGCGATCCTGACAAGGAGAATTTGTGTCTATATGGATTTCCGAATGAAACGTGGGAAGTGAATTTGCCTGTTGAGGAAGTGCCTCCTGAACTTCCTGAGCCAGCATTAGGTATCAACTTTGCCAGAGATGGCATGCAAGAGAAGGATTGGTTATCACTAGTTGCAGTTCACAGTGACTCATGGCTGCTTGCTGTTGCTTTCTATTTTGGTGCTCGCTTTGGATTTGGCAAGAATGAAAGGAAAAGGCTTTTCCAGATGATCAATGATCTGCCAACTATCTTTGAAATTGTTACAGGAAGTGCCAAGCAATCAAAGGATCAACCAGCTGCTCACAACAATGGTAACAAAAGCAAATCAAGTGGAAAGATGGCCAAAGGAGTGAAGATGTCTGCACCACCGAAAGAAGAGGATGATAGTGGAGAAGAGGAAGAAGATGACGATGAACAAGGTGCGACATGTGGTGCCTGTGGCGATAATTATGGGAATGATGAATTCTGGATTTGTTGTGATATGTGCGAGAGATGGTTCCATGGCAAATGTGTTAAAATTACTCCCGCCAAGGCTGAGCACATCAAGCAATACAAGTGCCCAAGTTGCAGTAACAAGAGGGCTAGAGTTTGA 741 0.4494 MEGIPHPLPRTVEEVFSDFKGRRAGLIKALTTDVDKFYQQCDPDKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEIVTGSAKQSKDQPAAHNNGNKSKSSGKMAKGVKMSAPPKEEDDSGEEEEDDDEQGATCGACGDNYGNDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03771 246 Pfam Alfin 11 138 IPR021998 GO:0006355|GO:0042393
Arst1g03771 246 ProSitePatterns Zinc finger PHD-type signature. 193 239 IPR019786 -
Arst1g03771 246 ProSiteProfiles Zinc finger PHD-type profile. 190 242 IPR019787 -
Arst1g03771 246 Pfam PHD-finger 193 242 IPR019787 -
Arst1g03771 246 SUPERFAMILY FYVE/PHD zinc finger 181 243 IPR011011 -
Arst1g03771 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 241 IPR013083 -
Arst1g03771 246 MobiDBLite consensus disorder prediction 141 160 - -
Arst1g03771 246 SMART PHD_3 192 240 IPR001965 -
Arst1g03771 246 PANTHER CPG BINDING PROTEIN 9 245 IPR045104 GO:0006355|GO:0042393
Arst1g03771 246 CDD PHD_AL_plant 193 242 IPR044104 -
Arst1g03771 246 MobiDBLite consensus disorder prediction 141 189 - -
Arst1g03771 246 FunFam PHD finger alfin-like protein 185 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03771 Arst-Chr1 98918914 98922921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03771 1 243 Alfin-like Transcription Factor Family AT1G14510 79.116 4.99e-131 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Arst1g03771 Alfin 9.7e-70 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03771 K26274 - gmx:100807826 463.766