Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03768 ATGGCAATTGCAGCGCCGAATTCATCTCCGACAATGAGTCTGAGTCACAGCCACAGCCACGAGGACGGGGGGACGACGACGGCGGCCTCCACCACGAACGACAACCTGAACGGGAACGGGAAGCAAGAGGATGATGATCACGAGCATGACATGGTGATGCCGGGGTTTCGTTTTCACCCGACAGAAGAAGAGCTGGTGGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAACGTTTCAACGTTGAGCTCATTACTTTCCTTGATCTTTATCGCTATGACCCTTGGGAGCTTCCTGCGTTGGCGGCGATAGGAGAGAAGGAATGGTATTTCTATGTGCCTCGAGACAGAAAATACAGAAACGGAGATCGTCCGAATCGAGTGACGACGTCGGGTTATTGGAAGGCAACGGGAGCAGATAGGATGATAAGGACGGAGAATTTCAGGTCCATCGGGCTGAAGAAAACCCTAGTTTTCTACTCTGGGAAAGCTCCTAAAGGCATCCGTACAAGTTGGATTATGAACGAGTACCGTTTGCCCCAACACGAAACTGAACGATACCAAAAGGCGGAGATATCGCTGTGCCGGGTTTACAAAAGAGCTGGAGTTGAAGATCATCCGTCGTTGCCGCGGTGTCTGCCAACGAGGGCTCCATCTTCAAGAACTGTTGATCATCAGAAGAACAAGCAGCAGCACCACAACGATCAACTCAACATGGGATTTGCGGGGAACACCGCCGACGGAGCTTCTGATAATCGTGATCATGATGTAACCACCGCTCTCGCCCTCTCCAAACACAACACAAATGCTTATCGTGCTCCTTCCATGGGACTCCCACCGCTGCTTCTTCCCTTGGACGACGAAGCCGCCTTCGTCCTCATGCAGCAGCAGCAGCACCATGCTGGCCCTTCTTCAGGAACCACCACCATGATGGATGATCTCAACAGACTTGTAAGCTATCAACACCAGTACTACAACAGCAGCAGTAGCAGTAGTAACAATAATAATCCCAATCATCATCATCACCTGTTAATGCAACAACAACAACAGCAGCAGCAGCAAACTCCTCCTGCAATAATGTCTCTGAATAACACTCCTTCTCCGCTTGCAACCGCCTTCTCTGACCGCCTGTGGGAGTGGAATCCACTCCCGGAGGCCAACCAGCGCCAGTACAGCAACATGTCCTTCAAGTAA 1191 0.5139 MAIAAPNSSPTMSLSHSHSHEDGGTTTAASTTNDNLNGNGKQEDDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPTRAPSSRTVDHQKNKQQHHNDQLNMGFAGNTADGASDNRDHDVTTALALSKHNTNAYRAPSMGLPPLLLPLDDEAAFVLMQQQQHHAGPSSGTTTMMDDLNRLVSYQHQYYNSSSSSSNNNNPNHHHHLLMQQQQQQQQQTPPAIMSLNNTPSPLATAFSDRLWEWNPLPEANQRQYSNMSFK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03768 396 FunFam NAC domain-containing protein 35 61 202 - -
Arst1g03768 396 SUPERFAMILY NAC domain 52 198 IPR036093 GO:0003677|GO:0006355
Arst1g03768 396 MobiDBLite consensus disorder prediction 1 52 - -
Arst1g03768 396 MobiDBLite consensus disorder prediction 1 38 - -
Arst1g03768 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 49 350 - -
Arst1g03768 396 Pfam No apical meristem (NAM) protein 54 178 IPR003441 GO:0003677|GO:0006355
Arst1g03768 396 ProSiteProfiles NAC domain profile. 52 199 IPR003441 GO:0003677|GO:0006355
Arst1g03768 396 MobiDBLite consensus disorder prediction 324 365 - -
Arst1g03768 396 Gene3D NAC domain 61 202 IPR036093 GO:0003677|GO:0006355
Arst1g03768 396 MobiDBLite consensus disorder prediction 208 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03768 Arst-Chr1 98884258 98886213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03768 25 396 NAC Transcription Factor Family AT2G02450 49.539 9.91e-121 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst1g03768 NAM 4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03768 - - gmx:100792622 481.87