Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst1g03737 | ATGAAACCCTCAATCGATGACGTTACCTTACCCCCCGCCGCCGCCACCAACTCTGCCGCACCATCCAAGCCTGTCTTCCTTACCAAAGCCCAGCGCGAGCAATTGGCACTCCAGCGCCGTCAGGAGGAAATCGCCAACCAGAAGCGCCGCCAAGAGCAGCTCCTTTCTCGTAATCGACCTTCCTCCGATTCCGCGGCCGATTCCAAACCCTCCGCTGACTCCGATCGGCGCGACCGCGACCGCGACCGCGACCGCGACAGGGACAGGGACAGGGATAGGGATAGGGACAGGGACAGAGACCGCGAACGAGAACGGGAACGGGAACGGGAGCGCGATAGGGCACGCGATCGGGACCGCGAGGCGGAGCGACGGAACCGAGAGAGGGAGCGCGAAGAGGAAAGTAGGGCTCGGGAACGAGCACGGTTGGAGAAATTGGCGGAGCGGGAGCGCGAGAAGGAGCTCGAATCCATCAAAGAACAGTACCTTGGTTCGAAGAAGCCGAAGAAGCGCGTGATCAAGCCCAGCGAGAAGTTTCGTTTCTCCTTCGACTGGGAGAACACCGAGGACACATCTCGCGACATGAACTCCCTCTACCAGAACCCTCACGAGGCTCAGCTCCTCTTCGGCCGCGGCTTCCGCGCCGGCATGGACCGCCGCGAGCAGAAGAAGCTCGCCGCCAAGAACGAGAAGGAGATGCGCGAGCAGATCCGTCGCAAGGACGGCGTGGAGGAGAAGCCCGAGGAGGCCGATGCCCAGCGCCGCAAGGAGGCTGCTGCCGACCTCTACGACACCTTCGACATGAGGGTTGACCGCCATTGGAGCGAGAAGAAGCTTGAGGAAATGACGGAGAGGGATTGGCGTATCTTCAGGGAGGACTACAACATCTCCTACAAGGGTTCCAAAATACCTCGCCCCATGCGGAGCTGGGTAGAGAGCAAGCTCAGCAATGAGCTTCTGAAGGCGGTGGAGAAGGCTGGGTACAAGACCCCTTCCCCCATTCAGATGGCTGCAATTCCCCTTGGCTTGCAGCAGCGTGATGTCATTGGCATTGCCGAGACCGGTTCCGGTAAGACTGCTGCTTTTGTTCTTCCCATGTTGAGTTACATTACTAGGCTTCCCCCCATGAGTGAGGAGAATGAGGCTGAGGGTCCCTATGCTGTTGTTATGGCTCCGACTCGCGAGCTTGCCCAGCAGATTGAGGATGAGACTGTTAAGTTTGCTCAGTATTTGGGTATTAAGGTTGTCTCCATTGTTGGTGGTCAGTCCATTGAGGAACAAGGGTTTAAGATTAGGCAAGGCTGTGAGATTGTCATTGCTACTCCAGGTCGTTTGATAGATTGTTTAGAGCGGCGATATGCTGTGCTGAACCAATGCAATTATGTTGTTCTCGATGAGGCGGATCGCATGATTGATATGGGTTTTGAGCCACAGGTGATGGGTGTCTTGGATGCCATGCCTTCCAGCAACTTGAAACCTGAGAATGAAGATGAGGAGCTTGATGAGAAGAAGATTTATAGGACCACTTATATGTTCAGTGCCACCATGCCTCCAGCAGTGGAGAGGCTTGCTAGGAAGTATCTGAGGAATCCTGTTGTGGTGACCATTGGCACTGCCGGAAAGGCAACTGACTTGATCAGCCAACATGTGATAATGATGAAGGAATCTGAGAAATTCCATAAGCTTCAAAGGTTGCTTGATGAGCTTAATGACAAGACGGCAATTGTGTTTGTTAACACCAAGAAGAATGCGGATATGGTTGCCAAGAATTTGGACAAGGAAGGGTATCGTGTGACTACATTGCATGGAGGGAAGTCGCAGGAGCAGAGAGAGATTAGTCTGGAAGGGTTTAGGACCAAGAGATACAATGTTCTTGTTGCCACAGATGTTGCCGGACGTGGTATTGACATACCCGATGTGGCTCATGTGATAAACTATGATATGCCTGGGAACATTGAAATGTACACGCATCGCATTGGGCGTACTGGTCGTGCTGGAAAGACTGGTGTGGCAACAACATTCCTCACTCTTCAGGACACTGATGTCTTCTATGACCTCAAACAGATGCTTATTCAAAGCAACAGCCCTGTTCCACCTGAATTGGCAAGGCACGAAGCCTCCAAGTTCAAGCCAGGGACTATTCCCGACAGACCACCTAGACGAAATGACACTGTGTTTGCACATTAG | 2184 | 0.5353 | MKPSIDDVTLPPAAATNSAAPSKPVFLTKAQREQLALQRRQEEIANQKRRQEQLLSRNRPSSDSAADSKPSADSDRRDRDRDRDRDRDRDRDRDRDRDRDRERERERERERDRARDRDREAERRNREREREEESRARERARLEKLAEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREQIRRKDGVEEKPEEADAQRRKEAAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSNELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKFHKLQRLLDELNDKTAIVFVNTKKNADMVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLIQSNSPVPPELARHEASKFKPGTIPDRPPRRNDTVFAH | 727 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst1g03737 | 727 | SMART | helicmild6 | 584 | 665 | IPR001650 | - | |
Arst1g03737 | 727 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 243 | 704 | - | - | |
Arst1g03737 | 727 | FunFam | probable ATP-dependent RNA helicase DDX23 | 268 | 537 | - | - | |
Arst1g03737 | 727 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 560 | 704 | IPR001650 | - | |
Arst1g03737 | 727 | Pfam | DEAD/DEAH box helicase | 332 | 522 | IPR011545 | GO:0003676|GO:0005524 | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 37 | 170 | - | - | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 702 | 727 | - | - | |
Arst1g03737 | 727 | Gene3D | - | 268 | 537 | IPR027417 | - | |
Arst1g03737 | 727 | Gene3D | - | 538 | 725 | IPR027417 | - | |
Arst1g03737 | 727 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 383 | 686 | IPR027417 | - | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 220 | 255 | - | - | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 37 | 56 | - | - | |
Arst1g03737 | 727 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 307 | 335 | IPR014014 | GO:0003724 | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 695 | 727 | - | - | |
Arst1g03737 | 727 | Coils | Coil | 111 | 155 | - | - | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 69 | 166 | - | - | |
Arst1g03737 | 727 | Coils | Coil | 27 | 57 | - | - | |
Arst1g03737 | 727 | SMART | ultradead3 | 326 | 548 | IPR014001 | - | |
Arst1g03737 | 727 | CDD | DEADc_DDX23 | 318 | 534 | - | - | |
Arst1g03737 | 727 | FunFam | probable ATP-dependent RNA helicase DDX23 | 538 | 726 | - | - | |
Arst1g03737 | 727 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 338 | 533 | IPR014001 | - | |
Arst1g03737 | 727 | Coils | Coil | 219 | 245 | - | - | |
Arst1g03737 | 727 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Arst1g03737 | 727 | Coils | Coil | 551 | 571 | - | - | |
Arst1g03737 | 727 | CDD | SF2_C_DEAD | 545 | 674 | - | - | |
Arst1g03737 | 727 | Pfam | Helicase conserved C-terminal domain | 557 | 665 | IPR001650 | - | |
Arst1g03737 | 727 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 462 | 470 | IPR000629 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst1g03737 | Arst-Chr1 | 98702516 | 98705238 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst1g03737 | 305 | 687 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.510 | 1.40e-60 | 207 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst1g03737 | K12858 | - | gmx:100799264 | 1129.39 |