LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g03736	ATGGACTCCAAGACTAGCACCAAAGCTCCTCCAAAACACCATCACAAGACAGCTGTGATCCAAACCTTAGAAACAAAAGACACCAAGCCTTCTCATCTGCAGGTTCCGAAGGCAGACAAGCCTGAGCTGGCTGCTTCTGGAGATATATCAAGGCTTGCACAAAACACATTGAAGCAGAATACTGGGGAAACTTCCGAAGACAAGAAGTCGGGAAGTTCAACTAGAAAGGGGTCTGATTCCCTGAGTAAAAGATTTGGTTCTGGACCCTCTGGTTCTGAACAGGCTGTTAATGAGACCAGAGGTTCTCAGGAAAACCTTATTGATCAAGAGAAAAAGTCATCAGTATATGGAAGCGTGAAGAACAGTTCTGTTTCGGCCAAAATAAGTGATGGGGCTAGTAGTATTGCAAAGACCAGTGGAAGTGCCAAGATCAGTGATCGAGCTGATCCTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGCACAAGTAGTGATGTGAGCGATGAGAGTAGCTGCAGCAGCTTTAGTAGCAGCATTAACAAGCCTCACAAGGCTAATGATTTGAGATGGGAAGCCATCCAAGCTGTTCGAGCTAGAGATGGGGTACTGGGTTTAGGTCACTTTAGGCTACTGAAGAGGTTGGGTTGTGGAGATATTGGCAGTGTATATCTCTCTGAACTGAGCGGAACTAAATGTTATTTTGCAATGAAGGTAATGGACAAGGCATCCCTGGCTAGTCGTAAAAAACTACTCCGTGCTCAGACAGAAAGAGAAATACTTCAGTCATTGGACCACCCCTTCCTTCCGACTTTGTATACCCATTTTGAGACAGAGAAGTTCTCGTGTTTGGTAATGGAATTCTGCCCTGGTGGGGACTTGCATACTCTTAGACAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAGTTTTATGTGGCAGAAGTCCTCCTGGCTTTGGAGTACCTTCACATGCTTGGGATTGTCTACCGTGATCTTAAGCCAGAAAATGTACTTGTTAGGGATGACGGACATATTATGCTCTCTGACTTTGACCTTTCCCTCCGTTGTGCTGTTAGTCCAACCCTTGTAAAAACCTCATCTACAGATTCTGAGCCTTTAAGAAAGAATCCTGGTTATTGTGTCCAACCTGCATGTATTGAGCCGCCATCCTGCATCCAGCCTTCTTGTGTTGCTCCTACTACATGTTTTTCACCCCGACTCTTTTCCAGCAAATCAAAGAAGGAAAGGAAACCCAAAACTGAAATTGGCAATCAAGTGAGTCCACTACCCGAGTTGATAGCAGAACCCACTGATGCTAGGTCAATGTCATTTGTCGGAACCCACGAATACCTGGCACCTGAGATCATTAAGGGTGAAGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGAATATTTTTATATGAGCTGTTGTTCGGGAAAACACCGTTCAAGGGATCTGGAAATCGAGCTACATTGTTTAATGTTGTAGGCCAGCCTCTGCGGTTTCCAGAAGCACCCATTGTCAGTTTTGCAGCAAGGGATCTTATAAGGGGGTTGCTTGTCAAGGAACCTCAGCATAGATTGGCATATAAAAGAGGGGCTACTGAGATAAAGCAACATCCGTTTTTTGAAGGTGTGAATTGGGCATTGATCCGGTGTGCTACCCCGCCAGAGATCCCCAAGACAGTAGAGTATGAGAAGATTCCTTCCCCAGCTTCATCAGCCAGTGAAAAGGCTGTTCACCATAAGTCAATACCTGATCATAAAGGTTCTGATAATTACCTTGAGTTTGATTTCTTTTAG	1815	0.4501	MDSKTSTKAPPKHHHKTAVIQTLETKDTKPSHLQVPKADKPELAASGDISRLAQNTLKQNTGETSEDKKSGSSTRKGSDSLSKRFGSGPSGSEQAVNETRGSQENLIDQEKKSSVYGSVKNSSVSAKISDGASSIAKTSGSAKISDRADPVESGKSSICRGSTSSDVSDESSCSSFSSSINKPHKANDLRWEAIQAVRARDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNPGYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKERKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPIVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKTVEYEKIPSPASSASEKAVHHKSIPDHKGSDNYLEFDFF	604

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g03736	604	SMART	serkin_6	209	547	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g03736	604	MobiDBLite	consensus disorder prediction	156	174	-	-
	Arst1g03736	604	SUPERFAMILY	Protein kinase-like (PK-like)	185	572	IPR011009	-
	Arst1g03736	604	CDD	STKc_phototropin_like	208	565	-	-
	Arst1g03736	604	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	330	342	IPR008271	GO:0004672\|GO:0006468
	Arst1g03736	604	FunFam	Serine/threonine-protein kinase D6PK-like	207	292	-	-
	Arst1g03736	604	MobiDBLite	consensus disorder prediction	1	174	-	-
	Arst1g03736	604	PANTHER	FLIPPASE KINASE 1-RELATED	52	571	-	-
	Arst1g03736	604	Gene3D	Phosphorylase Kinase; domain 1	203	294	-	-
	Arst1g03736	604	Pfam	Protein kinase domain	210	362	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g03736	604	Pfam	Protein kinase domain	444	547	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g03736	604	FunFam	Serine/threonine-protein kinase AGC1-7	440	565	-	-
	Arst1g03736	604	MobiDBLite	consensus disorder prediction	75	141	-	-
	Arst1g03736	604	FunFam	serine/threonine-protein kinase D6PK-like	293	360	-	-
	Arst1g03736	604	ProSiteProfiles	Protein kinase domain profile.	209	547	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst1g03736	604	Gene3D	Transferase(Phosphotransferase) domain 1	295	564	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g03736	Arst-Chr1	98671568	98675090	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst1g03736	104	604	AGC Kinase Gene Family	AT5G47750	83.897	0.0	857

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Arst1g03736		Pkinase	9.4e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g03736	K08286		-	gmx:100781600	1026.93