Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03733 ATGAGAAATTTGGAGATACAAATGGGCCAACTTGCTCAAAGAATGGAAAAATCCACAAATTTTTTTTCCAGTGATACAATCCCAAACCCACAGGAAGAATGCAAGGCTATTTATTTGAGAAATGGAAAGGTAGTAAGAGAAGAGAAGGAAGAAACCAAGGAGTCCAGTGACAAACAAGGGAAAGAAGCAACAGAGGACATCATTCAGCAAGAGGAGCATGTGACTCCCACCATACTTTTTGTAGATAGAAAGTATGAGGAGGCATTATTCCAGTATGAACTTGCCCTACAAGTTGCACTTAACATGTCTTCATCGGTGGAAGTACGTTTGATCTGCCATGCAAATCGTGCTGCATGCTATCAGAAACTGGGAAAATATGACAGCACAGTTAAAGAATGCACACAAGCATTAGAACTGAACCCTGCATACATTATTAAAGCATTGGCAAGAAGAGGAGAAGCCCATGACAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAGGATCTTAGAAATTGATCCGTCAAATGATCAAGCCAGGAAGGGTATTTGCCGACTTGAGCCGCTTGCTGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATGGACAAGTTTTTTGTTGTCTTTATCTTTGTTTTCTAA 648 0.4028 MRNLEIQMGQLAQRMEKSTNFFSSDTIPNPQEECKAIYLRNGKVVREEKEETKESSDKQGKEATEDIIQQEEHVTPTILFVDRKYEEALFQYELALQVALNMSSSVEVRLICHANRAACYQKLGKYDSTVKECTQALELNPAYIIKALARRGEAHDKLEHFEEAIADMKRILEIDPSNDQARKGICRLEPLAAEKREKMKEEMMDKFFVVFIFVF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03733 215 ProSiteProfiles TPR repeat profile. 145 178 IPR019734 GO:0005515
Arst1g03733 215 SUPERFAMILY TPR-like 78 189 IPR011990 GO:0005515
Arst1g03733 215 MobiDBLite consensus disorder prediction 47 68 - -
Arst1g03733 215 Pfam Tetratricopeptide repeat 146 178 IPR013105 -
Arst1g03733 215 Gene3D Tetratricopeptide repeat domain 53 203 IPR011990 GO:0005515
Arst1g03733 215 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 47 206 - -
Arst1g03733 215 Pfam Tetratricopeptide repeat 112 142 IPR001440 GO:0005515
Arst1g03733 215 SMART tpr_5 110 143 IPR019734 GO:0005515
Arst1g03733 215 SMART tpr_5 145 178 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03733 Arst-Chr1 98636093 98643437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03733 80 201 Calmodulin-binding Proteins AT3G25230 36.154 4.39e-10 57.0