Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03679 ATGGATGTTGATTCGGAGCCACTCAATTCACAAGAGAACGTTGAAGATTGCTTGATGACCAGTGTGGAAGAGAATGTAAATTGCACTTGTGATTGCGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATGATATTATAAACCAGACATTTGAAACATCAGATGCAGCTTATAACTTGTATGTGCGTTATGCAAGGTGTGTCGGGTCCGGAGTTCGCAAGGGTGATATAGCACGTGGAAAAGATGGAACACAACGCAGAAGGCGATTTTTTTGCAACAAGGAAGGAAAGAGAGCCGATAAATACATCTCTAATTTGAACAGGAAAAGGGAGCATAAAGCACTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGATGCCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCCCAATGCTTGGTACACTTAATTCCAAACCACCGTGGGATGAATGAGGCTCAAAAAGCTCAGGCAAACACCATGCACTATAATGGTCTTCCAAGCTCTAAGATAATGGGACTAATGGTAGGCCAAGCTGGGGGTTATGCTAATGTCGGGTTCACAAAGAAGGATCTGAATAACCACATTGAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCTAATGCAACAATTAGCTATCTACTTGGAAAAGCCGATGTTGACCCCATGGCCATTGCAAGGTACAGTGCTACTGATGAAAGTCGGCTGGCGAATCTATTTTGGGCAGATGGCATTTGTAGGGCGGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCGGAAAAATAAGTACAGAAGACCGTTGGTTATCTTCTCGGGTTGTAACCATCACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAATGAACAAACAGCAACATATACGTGGTTGTTGCAAAACTTCTTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGATGGTGATGAGGCAATGAAGGCAGCAATTCAAGAAATCTTTCCAAATGCAACTCACCGATTATGTGGTTGGCACATTCAGAGAAATGTAACAGCAAACATAAAAAGCAAAGGTTTTTCCGACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGAATGAATTTGAAGGATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTACTAGATGAGTATCAAAAGAGGAAAAGCTGGGCAAGCGCCTACTTGCGAGATAAATTCTGTGCTGGATTTAGAACAACATCAAGGTGTGAAGGGATAAACAACTTCATCAAGAGGTTTATTGGCATTCGTCAAAGTCTTTTAGAGCTAGTCCAGAATCTTGAACATGCTCTCAGGGATTATAGACATAACGAATTAGTTTCTCAATTTAAGACGGTGTACGGAGAGCCTGTGTTAACAACTCGCTTAGCTGCATTGGAGCTTTGTGCTGTAAATTTTTACACACGGGAGATGTTTGGCAAAGTAAAAACAGAAATTGAAGGAGTGGCTGCATTAGATGTTATAAATGAGGAAAATATATCAACTACTGTTGTTTTAAAAGTTAAGGAGTATGACAGAGGGCAACATATATACACCGTACTTTATGAGCGCAACACCGAGAATATGGAGTGTGAATGTAGTAGGTGGAGTAGTGAAGGCATTCCCTGTAGCCACATGTTTTGTGCCATGAAAAGGCTAGGTTTACAGAAGTTGCCAGAAAGTCTTCTTTTGAGAAGATGGTCCAAGGATGCCAAAAAGTATCCGGATGAAAGTTCAGCTGGAAGCACTGTGCAAGATGGAGAAAGAGATTTTTTAATGCGCTATGGCGCATTGTCAGTGGCAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTTTCTCGTTTGACCAAAATACTAGAGCAAAAGTCGTGCTTGAAAAGAGGAACAAGAGATTCTCCCATGCCGAACTTTGTTGGTGACCCTTCAGTTGTCAAGACAAAAGGTGCACCAAAGGGAAAAAAAGAGAGTAGAAAACGGAGGTGCACTAAATGCAACAATGCTGGTCATGTAAAGAAGAATTGTCCTGTGAAGAATGAGGGTGACAATTTGGGTGATAAGATTAGTGGTGGCACACAGGCTAGCTTTGGTGTAGAAGAGGAGCTTCCCAAAGACCCTATGGCTTCTCAAGGGACGCAAGCTAACAATGATGATTTTCAGCAAAAATAA 2292 0.421 MDVDSEPLNSQENVEDCLMTSVEENVNCTCDCGGSSSKCVVVTADDIINQTFETSDAAYNLYVRYARCVGSGVRKGDIARGKDGTQRRRRFFCNKEGKRADKYISNLNRKREHKALTRTGCEAMLAVYFDAKTSAWRVKKLVEKHNHDLVPQCLVHLIPNHRGMNEAQKAQANTMHYNGLPSSKIMGLMVGQAGGYANVGFTKKDLNNHIERTRRAKLIGGDSNATISYLLGKADVDPMAIARYSATDESRLANLFWADGICRADYQCFGDVLAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFALIENEQTATYTWLLQNFLDVMLNKSPSVVVTDGDEAMKAAIQEIFPNATHRLCGWHIQRNVTANIKSKGFSDDFRRCLYAPWHPNEFEGYWENMIKKYGLEENEWVLDEYQKRKSWASAYLRDKFCAGFRTTSRCEGINNFIKRFIGIRQSLLELVQNLEHALRDYRHNELVSQFKTVYGEPVLTTRLAALELCAVNFYTREMFGKVKTEIEGVAALDVINEENISTTVVLKVKEYDRGQHIYTVLYERNTENMECECSRWSSEGIPCSHMFCAMKRLGLQKLPESLLLRRWSKDAKKYPDESSAGSTVQDGERDFLMRYGALSVAATWMVFLGAQDGPSFHDTMNEVSRLTKILEQKSCLKRGTRDSPMPNFVGDPSVVKTKGAPKGKKESRKRRCTKCNNAGHVKKNCPVKNEGDNLGDKISGGTQASFGVEEELPKDPMASQGTQANNDDFQQK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03679 763 Coils Coil 455 475 - -
Arst1g03679 763 MobiDBLite consensus disorder prediction 749 763 - -
Arst1g03679 763 PANTHER OS01G0519700 PROTEIN 46 718 - -
Arst1g03679 763 MobiDBLite consensus disorder prediction 693 708 - -
Arst1g03679 763 SUPERFAMILY Retrovirus zinc finger-like domains 693 721 IPR036875 GO:0003676|GO:0008270
Arst1g03679 763 SMART 26again6 560 587 IPR006564 GO:0008270
Arst1g03679 763 MobiDBLite consensus disorder prediction 671 763 - -
Arst1g03679 763 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Arst1g03679 763 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Arst1g03679 763 Pfam MULE transposase domain 272 366 IPR018289 -
Arst1g03679 763 ProSiteProfiles Zinc finger CCHC-type profile. 701 717 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03679 Arst-Chr1 98117273 98119678 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst1g03679 MULE 4.1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03679 - - ahf:112717474 1352.42