Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03653 ATGAAGCTCGACAACTCCAACAACTCCAACGGCCAGATTTCCGCCGGCGCCGACGACGACGTATTCGTGCCGCCGCTCAACTTCGCCATGGTCGATCAAGGCATTTTTAGGTCTGGTTTTCCCGACTCTGCCAACTTCAGCTTCTTAAAATCCCTTCGTCTCCGCACTGTTATATGTTTGTGCCCTGAACCGTATCCAGAAGTGACTTCTGAATTTCTCAAGGCCAACGGAATAAAGCTTTATCAATTCGGGATCGATGGATGTAAGGAACCCTTTGTCAACATCCCAGATGACACAGTTCGTGAAGCTTTGAAAGTAGTCCTCGATGTCAGGAACCACCCAGTACTAATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGCCTTGTGGGATGCATCAGAAGATTGCAGAAATGGTGCCTATCTTCTGTATTTGATGAGTACCAAAGGTTTGCAGGCGCCAAGGCCAGAGTTTCGGATCAGAGGTTCATCGAATTGTTTGATATTTCTTGTCTCAAGTCCAACCCGCTCTCATTTTCATGCTCCGGGAAATAG 555 0.4757 MKLDNSNNSNGQISAGADDDVFVPPLNFAMVDQGIFRSGFPDSANFSFLKSLRLRTVICLCPEPYPEVTSEFLKANGIKLYQFGIDGCKEPFVNIPDDTVREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQKWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKSNPLSFSCSGK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03653 184 PANTHER TYROSINE-PROTEIN PHOSPHATASE 22 174 - -
Arst1g03653 184 ProSiteProfiles Dual specificity protein phosphatase domain profile. 27 181 IPR020422 GO:0006470|GO:0008138
Arst1g03653 184 Pfam Tyrosine phosphatase family 23 175 IPR004861 -
Arst1g03653 184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 169 IPR029021 -
Arst1g03653 184 Gene3D Protein tyrosine phosphatase superfamily 21 171 IPR029021 -
Arst1g03653 184 ProSitePatterns Tyrosine specific protein phosphatases active site. 117 127 IPR016130 GO:0016311|GO:0016791
Arst1g03653 184 PRINTS Plant and fungal dual specificity phosphatase signature 22 39 IPR020428 GO:0016791
Arst1g03653 184 PRINTS Plant and fungal dual specificity phosphatase signature 59 72 IPR020428 GO:0016791
Arst1g03653 184 PRINTS Plant and fungal dual specificity phosphatase signature 95 109 IPR020428 GO:0016791
Arst1g03653 184 PRINTS Plant and fungal dual specificity phosphatase signature 78 92 IPR020428 GO:0016791
Arst1g03653 184 CDD PFA-DSP_Siw14 22 168 - -
Arst1g03653 184 FunFam probable tyrosine-protein phosphatase At1g05000 21 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03653 Arst-Chr1 97833547 97836728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03653 5 184 Protein tyrosine phosphatase (PTP) family AT4G03960 70.000 3.14e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03653 K18045 - gmx:100785520 324.709