Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03649 ATGAGTCAACTGGGTATGATGCTGCAGGAATCGTTGCGAGCTGAAACGGAGGCAAGAACCATTCTGGGCCTCTTAACGGACCAGATGGACGGCGTTGTCCACACAGGACAACGCAGAAGGAGAACTCTCAAGGACCGCTTCAGATTCACCGGAATGGGTTGCTGCGGTGCCACCTGGGTTTTCCGTCCCTCTCCCCTAACCCTCACTACGCACGCTGCACACCAACAAGAGGCGCCTGAGGCTGGAGCTGCAGTAGCCGCATCACCGCCGCAAGAAACGGACCCGGGTCAAGATCCGAACCGGGACGGGCCCGAATGCGAACGGCCCTCTACGGGGATGAATCTGGCTGCGGCATTGGCGGCGGAGCGTGAATTGCGGGGTTCGCAGGAGGAGGGGGAGAGGGATGTCGTGGGATCGGAGACGCCATGGAGGATGTCGCTGATGCGGCTGCTGGAGGAAACGGAAGGAGGAGGGGGAAGGGGTGGTGGTGGGGATAGTGAAGAAGGGGGTGATTGGGTGTGCTGCGTGTGCATGGGGCGGAAGAAAGGCGCGGCGTTCATACCATGTGGACACACGTTCTGCAGAGTGTGCTGTCGAGAGGTCTGGTTGAACCGGGGCACCTGCCCTCTTTGCAACCGTTCCATTCTAGAGATTCTCGATATCTTCTAA 669 0.5949 MSQLGMMLQESLRAETEARTILGLLTDQMDGVVHTGQRRRRTLKDRFRFTGMGCCGATWVFRPSPLTLTTHAAHQQEAPEAGAAVAASPPQETDPGQDPNRDGPECERPSTGMNLAAALAAERELRGSQEEGERDVVGSETPWRMSLMRLLEETEGGGGRGGGGDSEEGGDWVCCVCMGRKKGAAFIPCGHTFCRVCCREVWLNRGTCPLCNRSILEILDIF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03649 222 Pfam Zinc finger, C3HC4 type (RING finger) 173 216 - -
Arst1g03649 222 CDD RING-HC 174 211 - -
Arst1g03649 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 221 IPR013083 -
Arst1g03649 222 ProSiteProfiles Zinc finger RING-type profile. 174 212 IPR001841 -
Arst1g03649 222 MobiDBLite consensus disorder prediction 72 110 - -
Arst1g03649 222 SMART ring_2 174 211 IPR001841 -
Arst1g03649 222 PANTHER OS01G0917900 PROTEIN 5 222 - -
Arst1g03649 222 SUPERFAMILY RING/U-box 169 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03649 Arst-Chr1 97797887 97798865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03649 21 222 C3H Transcription Factor Family AT4G22250 50.237 5.06e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03649 - - gmx:106799504 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03649 1 97797887 97798865 Arst4g00704 4 5244434 5245687 PCT