Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03648 ATGAAATCCTTAAAGCAGAGAGGATGCAAGGCCTTATGCTGCAGCAGTTGTAGGAGGCTTAGTGTGTCTTCCACAGAGGAAGCAGAGAGTTCATCAGCCTCCGATCGGTTTCCTTCCGTGTCGAGCGTCGCACACGCCATGGTGCAAGAGAGACTTGACCAGTTGATTAGGGAAAGGAGGATGGAAGAGAGACAGAGGAGGCAGCAAAGCAGAGCCAGAGAAAGAGAAAGAACTAAGTTTGTTGTGATGGTGGCAATGGAGAAGTGCTCTTATGATCCAAGAGAAGATTTTAGGGAGTCCATGATGGAGATGATAACAGCAAATCGCATCAAAGAAGCCAAAGATCTTCGTAGCCTACTCAACTATTATATCTCCATGAACTCCAATGAGTACCATAGTCTTATACTTGAGCTTTTTCATGAGATTTTTAGGTGA 435 0.4506 MKSLKQRGCKALCCSSCRRLSVSSTEEAESSSASDRFPSVSSVAHAMVQERLDQLIRERRMEERQRRQQSRARERERTKFVVMVAMEKCSYDPREDFRESMMEMITANRIKEAKDLRSLLNYYISMNSNEYHSLILELFHEIFR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03648 144 Coils Coil 45 72 - -
Arst1g03648 144 NCBIfam uncharacterized plant-specific domain TIGR01568 84 142 IPR006458 -
Arst1g03648 144 ProSiteProfiles OVATE domain profile. 86 144 IPR006458 -
Arst1g03648 144 Pfam Transcriptional repressor, ovate 90 143 IPR006458 -
Arst1g03648 144 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 27 142 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03648 Arst-Chr1 97789956 97791068 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Arst1g03648 Ovate 2.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03648 - - gmx:102663136 176.792