Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03612 ATGGCTGATTTGTTGGAATGGCCGAAGCAAGATAAGCGCCGCTTACTTCATGTGGTTTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTATACTGAATGCTTTGGAATGAAGCTTTTGAGGCAAAGGGATGTACCAGAGGAGAAATACGCCAATGCTTTTCTCGGATTTGGCCCTGAAGAATCTCATTTTGTTGTGGAGTTAACATATAATTATGGAGTGAGTTCATATGACATTGGAGATGGCTTTGGACATTTTGCTATTGCAACACAAGATGTATACAAATTGGCTGAACACATCCGGTCCAAGGGTGGAAACATCACAAGGGAGCCTGGTCCGGTTCAGGGAGGGACCACGGTCATCGCCTTTGTTAAAGATCCTGACGGTTACACTTTTGGTCTCATCCAAAGACCTACCATCCATGACCCTTTTTGCCAAATAATGCTTCGTGTTGGTGACTTGGAGCGCTCAATTCAGTTTTATGAAAAGGCTGTGGGTCTTAAGTTGTTGAGGAAGGTTGACAAGCCTGAGTACAAGTACACTGCAGCACTTCTTGGGTATGGAGAGGAGCACGAAACAACTGTGTTGGAGTTGACATACAACTATGGTGTCACTGAATACTCTAAGGGAAATGCTTATGCACAGATTGCTATTGGTACCGACGATGTATACAAGAGCGCAGAAGTTGTTAGCGCCATTGCACAAGAGCTTGGAGGCAAGATTACTCGGCCACCGGGTCCAATTCCCGGCATTAACACGAAAATTACTTCTTTCTTGGATCCTGATGGATGGAAAACTGTCTTAGTTGACAATGAAGATTTCCTGAAGGAACTGAACTGA 843 0.4437 MADLLEWPKQDKRRLLHVVYRVGDLDRTIKFYTECFGMKLLRQRDVPEEKYANAFLGFGPEESHFVVELTYNYGVSSYDIGDGFGHFAIATQDVYKLAEHIRSKGGNITREPGPVQGGTTVIAFVKDPDGYTFGLIQRPTIHDPFCQIMLRVGDLERSIQFYEKAVGLKLLRKVDKPEYKYTAALLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSAIAQELGGKITRPPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03612 280 CDD GlxI_Ni 15 136 - -
Arst1g03612 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 144 IPR029068 -
Arst1g03612 280 Gene3D - 141 280 IPR029068 -
Arst1g03612 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Arst1g03612 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Arst1g03612 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 148 266 IPR004360 -
Arst1g03612 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Arst1g03612 280 NCBIfam lactoylglutathione lyase 14 138 IPR004361 GO:0004462|GO:0046872
Arst1g03612 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 271 IPR029068 -
Arst1g03612 280 FunFam Lactoylglutathione lyase 143 280 - -
Arst1g03612 280 PANTHER LACTOYLGLUTATHIONE LYASE 3 279 - -
Arst1g03612 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Arst1g03612 280 Gene3D - 1 138 IPR029068 -
Arst1g03612 280 FunFam Lactoylglutathione lyase 11 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03612 Arst-Chr1 97454025 97455966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03612 147 271 Calmodulin-binding Proteins AT1G08110 28.667 1.13e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03612 K01759 - gmx:100793089 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03612 1 97454025 97455966 Arst1g03612 1 97454025 97455966 ECH
Arst4g00634 4 4652977 4656043 Arst1g03612 1 97454025 97455966 ECH
Arst1g03612 1 97454025 97455966 Arst4g00634 4 4652977 4656043 PCT