Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03577 ATGATATCATCCTTAAAGTACACAGCACCCTCACTCCTCGCCGGCTCTGCTGCATTCTCCTGCAGAAAGCGTGTTCCTGTTCCAAGGCTACCACCCTCTATTCAAAATCTTCAACAAAGCACTGCACTACCCTCTCTCTCTTCCCATAAACCACTTTACATTATTCCATGCACTCAGAACCTCACATTCTCAACTAAACCTAGAAGGAAGGTTGCAGAGTGTCATGCCTATGAGGCAGATAAGTCACAACCACAAGCAGCAGGGACATCAGAGGCGGCTCAGAAGCTCAAGATTGGTTTGTATTTTGCTACATGGTGGGCACTGAACGTTGTCTTCAACATATACAACAAGAAGGTTCTCAATGCTTTTCCTTACCCTTGGCTCACTTCCACTTTGTCCCTCGCCGCCGGCTCTCTTATCATGTTCATCTCCTGGGCCACAAGGCTCGCTCATGTCCCTAAAGTTAACATGGATTTCTGGAAGGCCTTGTTCCCTGTTGCAGTAGCACACACCATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTGTCATTTACTCACATCATCAAGAGTGGAGAACCGGCTTTCAGCGTCCTAGTATCGAGGTTCTTGCTCGGCGAATCGTTCCCTATACCGGTTTACTTATCACTGGTGCCAATTATTGGAGGTTGTGCTCTTGCTGCTGTGACCGAACTCAATTTTAATATGATCGGGTTTATGGGGGCTATGATATCAAATTTGGCATTTGTGTTTAGGAACATATTCTCAAAGAAAGGAATGAAGGGCATGTCCGTTAGTGGAATGAACTATTATGCTTGCCTTTCCATATTGTCTCTATTGATTCTCACACCTTTTGCCATTCTTGTGGAGGGTCCTAAGATGTGGGCTGTTGGCTGGCAAACTGCCCTCTCTCAAATTGGTCCAAATTTTGTTTGGTGGGTAGTTGCTCAGAGTGTGTTCTACCACTTGTATAATCAAGTCTCGTACATGTCTCTTGATCAAATATCTCCCTTGACATTTAGCATAGGGAACACAATGAAGAGAATTTCAGTAATTGTCTCTTCCATTCTGATCTTCCATACGCCAATTCATCCCAGCAATGCACTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTTTATTCACAGGCAAAACAGTGA 1170 0.4496 MISSLKYTAPSLLAGSAAFSCRKRVPVPRLPPSIQNLQQSTALPSLSSHKPLYIIPCTQNLTFSTKPRRKVAECHAYEADKSQPQAAGTSEAAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMFISWATRLAHVPKVNMDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPIPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAILVEGPKMWAVGWQTALSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIHPSNALGAAIAILGTFLYSQAKQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03577 389 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Arst1g03577 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 386 - -
Arst1g03577 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 232 - -
Arst1g03577 389 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 96 388 IPR004696 GO:0016020|GO:0022857|GO:0055085
Arst1g03577 389 Pfam Triose-phosphate Transporter family 96 385 IPR004853 -
Arst1g03577 389 PANTHER SOLUTE CARRIER FAMILY 35 97 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03577 Arst-Chr1 97130685 97132786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03577 40 388 Antiporters AT5G54800 78.056 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03577 K15283 - gmx:100804205 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03577 1 97130685 97132786 Arst1g03577 1 97130685 97132786 ECH
Arst1g03577 1 97130685 97132786 Arst4g00597 4 4199237 4201878 PCT